TBC23_CHICK
ID TBC23_CHICK Reviewed; 679 AA.
AC Q5F415;
DT 15-MAY-2007, integrated into UniProtKB/Swiss-Prot.
DT 15-MAR-2005, sequence version 1.
DT 03-AUG-2022, entry version 72.
DE RecName: Full=TBC1 domain family member 23;
GN Name=TBC1D23; ORFNames=RCJMB04_3n7;
OS Gallus gallus (Chicken).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Phasianinae; Gallus.
OX NCBI_TaxID=9031;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=CB; TISSUE=Bursa of Fabricius;
RX PubMed=15642098; DOI=10.1186/gb-2004-6-1-r6;
RA Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J., Fiedler P.,
RA Kutter S., Blagodatski A., Kostovska D., Koter M., Plachy J., Carninci P.,
RA Hayashizaki Y., Buerstedde J.-M.;
RT "Full-length cDNAs from chicken bursal lymphocytes to facilitate gene
RT function analysis.";
RL Genome Biol. 6:R6.1-R6.9(2005).
CC -!- FUNCTION: Putative Rab GTPase-activating protein which plays a role in
CC vesicular trafficking. Involved in endosome-to-Golgi trafficking. Acts
CC as a bridging protein by binding simultaneously to golgins, located at
CC the trans-Golgi, and to the WASH complex, located on endosome-derived
CC vesicles (By similarity). Plays a role in brain development (By
CC similarity). May act as a general inhibitor of innate immunity
CC signaling (By similarity). {ECO:0000250|UniProtKB:Q7SXV1,
CC ECO:0000250|UniProtKB:Q8K0F1, ECO:0000250|UniProtKB:Q9NUY8}.
CC -!- SUBCELLULAR LOCATION: Golgi apparatus, trans-Golgi network
CC {ECO:0000250|UniProtKB:Q9NUY8}.
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DR EMBL; AJ851485; CAH65119.1; -; mRNA.
DR RefSeq; NP_001025955.1; NM_001030784.1.
DR AlphaFoldDB; Q5F415; -.
DR SMR; Q5F415; -.
DR STRING; 9031.ENSGALP00000024604; -.
DR PaxDb; Q5F415; -.
DR GeneID; 418383; -.
DR KEGG; gga:418383; -.
DR CTD; 55773; -.
DR VEuPathDB; HostDB:geneid_418383; -.
DR eggNOG; KOG3636; Eukaryota.
DR InParanoid; Q5F415; -.
DR OrthoDB; 429640at2759; -.
DR PhylomeDB; Q5F415; -.
DR PRO; PR:Q5F415; -.
DR Proteomes; UP000000539; Unplaced.
DR GO; GO:0005829; C:cytosol; IEA:GOC.
DR GO; GO:0005802; C:trans-Golgi network; IBA:GO_Central.
DR GO; GO:1990403; P:embryonic brain development; ISS:UniProtKB.
DR GO; GO:0042147; P:retrograde transport, endosome to Golgi; IBA:GO_Central.
DR GO; GO:0099041; P:vesicle tethering to Golgi; IBA:GO_Central.
DR Gene3D; 3.40.250.10; -; 1.
DR InterPro; IPR000195; Rab-GTPase-TBC_dom.
DR InterPro; IPR035969; Rab-GTPase_TBC_sf.
DR InterPro; IPR001763; Rhodanese-like_dom.
DR InterPro; IPR036873; Rhodanese-like_dom_sf.
DR InterPro; IPR039755; TBC1D23.
DR InterPro; IPR045799; TBC1D23_C.
DR PANTHER; PTHR13297; PTHR13297; 1.
DR Pfam; PF00566; RabGAP-TBC; 1.
DR Pfam; PF00581; Rhodanese; 1.
DR Pfam; PF19430; TBC1D23_C; 1.
DR SMART; SM00164; TBC; 1.
DR SUPFAM; SSF47923; SSF47923; 2.
DR SUPFAM; SSF52821; SSF52821; 1.
DR PROSITE; PS50206; RHODANESE_3; 1.
DR PROSITE; PS50086; TBC_RABGAP; 1.
PE 2: Evidence at transcript level;
KW Developmental protein; Golgi apparatus; Reference proteome.
FT CHAIN 1..679
FT /note="TBC1 domain family member 23"
FT /id="PRO_0000287500"
FT DOMAIN 38..219
FT /note="Rab-GAP TBC"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00163"
FT DOMAIN 327..439
FT /note="Rhodanese"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00173"
FT REGION 454..478
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 679 AA; 76011 MW; F4A773DD807909C9 CRC64;
MAEGDGAPPS SWEKDLAEAL EEGGCDLETV RNIIQGRQLP ADLRAKVWKI ALNVVGKGDS
LASWDGCLDL PEQSIIHKDC QELIDRLSVP EDEKSVLLLD IESVITFYCK SRNVKYSSCL
GWIHLLRPLV HLRLPRSDLY NCFYAIMNKY IPRDCFLKGR PFHLFRLLLQ YHEPELCSFL
DTKKMTPDSY ALNWLGSLFS YYCSTEVTQA IWDGYLQQAD PFFIYFLMLI ILVNAKDVIL
AQESEKEEML KFLETSPANL EVEDIEDLFS LAQYYCSKTP ASFRKDNHSL FGSSLLGLKD
DDTDLSQALC LAVSVSEILQ ANQQQGEGVR FFVVDCRPAE QYNAGHLSTA FHLDSDLMLQ
NPSEFAQSVK SLLEAQKQSI ESGSIAGGEH LCFMGSGREE EDMYMNMVLA HFLQKNKEYV
SIARGGFMAL QQHLADINVE GPENGYGHWI ASTSGSRSSI NSSVDGDSPN GSSDGKGVKS
LVNKMTVALK TKSVNVKEKV ISFIENTSTP VDRHVSSSDR VGKPYRGVKP VFSIGDEEEY
DTDGIDSSSM SDDDRKEVVN IQTWINKPDV KYNFPCNEVK ENGHMFPSHL LVTATNMYCL
REIPSRKGLA YIQSRQALNS VVKITSKKKH PELITFKYGN SNTSGIEILA VERYLIPNAG
DATKAIKQQI MKVLDALES