TBG_COCH5
ID TBG_COCH5 Reviewed; 459 AA.
AC P40633; M2SYV7;
DT 01-FEB-1995, integrated into UniProtKB/Swiss-Prot.
DT 18-SEP-2013, sequence version 3.
DT 03-AUG-2022, entry version 105.
DE RecName: Full=Tubulin gamma chain;
DE AltName: Full=Gamma-tubulin;
GN Name=TUB4; ORFNames=COCHEDRAFT_1179534;
OS Cochliobolus heterostrophus (strain C5 / ATCC 48332 / race O) (Southern
OS corn leaf blight fungus) (Bipolaris maydis).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes;
OC Pleosporomycetidae; Pleosporales; Pleosporineae; Pleosporaceae; Bipolaris.
OX NCBI_TaxID=701091;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C5 / ATCC 48332 / race O;
RX PubMed=23236275; DOI=10.1371/journal.ppat.1003037;
RA Ohm R.A., Feau N., Henrissat B., Schoch C.L., Horwitz B.A., Barry K.W.,
RA Condon B.J., Copeland A.C., Dhillon B., Glaser F., Hesse C.N., Kosti I.,
RA LaButti K., Lindquist E.A., Lucas S., Salamov A.A., Bradshaw R.E.,
RA Ciuffetti L., Hamelin R.C., Kema G.H.J., Lawrence C., Scott J.A.,
RA Spatafora J.W., Turgeon B.G., de Wit P.J.G.M., Zhong S., Goodwin S.B.,
RA Grigoriev I.V.;
RT "Diverse lifestyles and strategies of plant pathogenesis encoded in the
RT genomes of eighteen Dothideomycetes fungi.";
RL PLoS Pathog. 8:E1003037-E1003037(2012).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C5 / ATCC 48332 / race O;
RX PubMed=23357949; DOI=10.1371/journal.pgen.1003233;
RA Condon B.J., Leng Y., Wu D., Bushley K.E., Ohm R.A., Otillar R., Martin J.,
RA Schackwitz W., Grimwood J., MohdZainudin N., Xue C., Wang R., Manning V.A.,
RA Dhillon B., Tu Z.J., Steffenson B.J., Salamov A., Sun H., Lowry S.,
RA LaButti K., Han J., Copeland A., Lindquist E., Barry K., Schmutz J.,
RA Baker S.E., Ciuffetti L.M., Grigoriev I.V., Zhong S., Turgeon B.G.;
RT "Comparative genome structure, secondary metabolite, and effector coding
RT capacity across Cochliobolus pathogens.";
RL PLoS Genet. 9:E1003233-E1003233(2013).
RN [3]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 66-330.
RC STRAIN=C5 / ATCC 48332 / race O;
RA Parkinson C., Luo H., Knight A., Ahlquist J., Perlin M.H.;
RL Submitted (AUG-1993) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Tubulin is the major constituent of microtubules. The gamma
CC chain is found at microtubule organizing centers (MTOC) such as the
CC spindle poles or the centrosome, suggesting that it is involved in the
CC minus-end nucleation of microtubule assembly (By similarity).
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm, cytoskeleton, microtubule organizing
CC center, spindle pole body {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the tubulin family. {ECO:0000305}.
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DR EMBL; KB445578; EMD90570.1; -; Genomic_DNA.
DR EMBL; X74455; CAA52464.1; -; Genomic_DNA.
DR PIR; S40209; S40209.
DR AlphaFoldDB; P40633; -.
DR SMR; P40633; -.
DR STRING; 701091.P40633; -.
DR EnsemblFungi; EMD90570; EMD90570; COCHEDRAFT_1179534.
DR eggNOG; KOG1374; Eukaryota.
DR HOGENOM; CLU_015718_1_0_1; -.
DR OMA; EHGINKE; -.
DR Proteomes; UP000016936; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0000930; C:gamma-tubulin complex; IEA:InterPro.
DR GO; GO:0005874; C:microtubule; IEA:UniProtKB-KW.
DR GO; GO:0005816; C:spindle pole body; IEA:UniProtKB-SubCell.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0031122; P:cytoplasmic microtubule organization; IEA:InterPro.
DR GO; GO:0007020; P:microtubule nucleation; IEA:InterPro.
DR GO; GO:0007017; P:microtubule-based process; IEA:InterPro.
DR CDD; cd02188; gamma_tubulin; 1.
DR Gene3D; 1.10.287.600; -; 1.
DR Gene3D; 3.30.1330.20; -; 1.
DR Gene3D; 3.40.50.1440; -; 1.
DR InterPro; IPR002454; Gamma_tubulin.
DR InterPro; IPR008280; Tub_FtsZ_C.
DR InterPro; IPR000217; Tubulin.
DR InterPro; IPR037103; Tubulin/FtsZ-like_C.
DR InterPro; IPR018316; Tubulin/FtsZ_2-layer-sand-dom.
DR InterPro; IPR036525; Tubulin/FtsZ_GTPase_sf.
DR InterPro; IPR023123; Tubulin_C.
DR InterPro; IPR017975; Tubulin_CS.
DR InterPro; IPR003008; Tubulin_FtsZ_GTPase.
DR PANTHER; PTHR11588; PTHR11588; 1.
DR Pfam; PF00091; Tubulin; 1.
DR Pfam; PF03953; Tubulin_C; 1.
DR PRINTS; PR01164; GAMMATUBULIN.
DR PRINTS; PR01161; TUBULIN.
DR SMART; SM00864; Tubulin; 1.
DR SMART; SM00865; Tubulin_C; 1.
DR SUPFAM; SSF52490; SSF52490; 1.
DR SUPFAM; SSF55307; SSF55307; 1.
DR PROSITE; PS00227; TUBULIN; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Cytoskeleton; GTP-binding; Microtubule; Nucleotide-binding;
KW Reference proteome.
FT CHAIN 1..459
FT /note="Tubulin gamma chain"
FT /id="PRO_0000048452"
FT REGION 440..459
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 441..459
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 142..148
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255"
FT CONFLICT 67
FT /note="L -> A (in Ref. 3; CAA52464)"
FT /evidence="ECO:0000305"
FT CONFLICT 119
FT /note="L -> W (in Ref. 3; CAA52464)"
FT /evidence="ECO:0000305"
FT CONFLICT 221
FT /note="N -> T (in Ref. 3; CAA52464)"
FT /evidence="ECO:0000305"
FT CONFLICT 246..248
FT /note="GYM -> AYS (in Ref. 3; CAA52464)"
FT /evidence="ECO:0000305"
FT CONFLICT 274
FT /note="Missing (in Ref. 3; CAA52464)"
FT /evidence="ECO:0000305"
FT CONFLICT 312
FT /note="K -> SH (in Ref. 3; CAA52464)"
FT /evidence="ECO:0000305"
FT CONFLICT 325..330
FT /note="GEADPS -> AKPTPQ (in Ref. 3; CAA52464)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 459 AA; 51489 MW; EC25A2DAC8423199 CRC64;
MPREIITLQA GQCGNSVGQQ FWQQLCQEHG INKDGNLEDF ATEGGDRKDV FFYQSDDTRY
IPRAILLDLE PRVLHSIQAS PYKNIYNPEN FYIHKDGTGA GNNWGMGYSM GEQVHEDILD
MIDREADGSD SLEGFMMLHS IAGGTGSGLG SYMLERLNDR FPKKLIQTYS VFPNTQDGDI
VVQPYNSLLS MRRLTQNADS VVVLDNGALT RIAADRLHVM NPSFEQTNQL VSTVMSASTT
TLRYPGYMHN DLVGIVASLI PTPRCHFLMT SYTPFSGENV EQAKTVRKTT VLDVMRRLLQ
PKNRMVSTNP TKKSCYMSIL NIIQGEADPS DVHKSLMRIR ERRLATFIPW GPASIQVALT
KKSPYVTSSH RVSGLMLANH TGIATLFKRI VAQYSTLRKR NAFLESYKRE VPFKDGLGEF
DEAKEVVQGL IAEYEEAEDA DYLTKETAPT DEAEDKRAG