TBL34_ARATH
ID TBL34_ARATH Reviewed; 410 AA.
AC O80919; Q94K45;
DT 19-FEB-2014, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2002, sequence version 2.
DT 03-AUG-2022, entry version 115.
DE RecName: Full=Protein trichome birefringence-like 34;
GN Name=TBL34; OrderedLocusNames=At2g38320; ORFNames=T19C21.19;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP GENE FAMILY.
RC STRAIN=cv. Columbia;
RX PubMed=17316173; DOI=10.1111/j.1365-313x.2006.02994.x;
RA Xin Z., Mandaokar A., Chen J., Last R.L., Browse J.;
RT "Arabidopsis ESK1 encodes a novel regulator of freezing tolerance.";
RL Plant J. 49:786-799(2007).
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=20388664; DOI=10.1104/pp.110.153320;
RA Bischoff V., Nita S., Neumetzler L., Schindelasch D., Urbain A., Eshed R.,
RA Persson S., Delmer D., Scheible W.R.;
RT "TRICHOME BIREFRINGENCE and its homolog AT5G01360 encode plant-specific
RT DUF231 proteins required for cellulose biosynthesis in Arabidopsis.";
RL Plant Physiol. 153:590-602(2010).
RN [6]
RP SUBCELLULAR LOCATION.
RX PubMed=21124849; DOI=10.1371/journal.pone.0015481;
RA Oikawa A., Joshi H.J., Rennie E.A., Ebert B., Manisseri C.,
RA Heazlewood J.L., Scheller H.V.;
RT "An integrative approach to the identification of Arabidopsis and rice
RT genes involved in xylan and secondary wall development.";
RL PLoS ONE 5:E15481-E15481(2010).
RN [7]
RP 3D-STRUCTURE MODELING.
RX PubMed=20657172; DOI=10.4161/psb.5.8.12414;
RA Bischoff V., Selbig J., Scheible W.R.;
RT "Involvement of TBL/DUF231 proteins into cell wall biology.";
RL Plant Signal. Behav. 5:1057-1059(2010).
CC -!- FUNCTION: May act as a bridging protein that binds pectin and other
CC cell wall polysaccharides. Probably involved in maintaining
CC esterification of pectins (By similarity). May be involved in the
CC specific O-acetylation of cell wall polymers (By similarity).
CC {ECO:0000250|UniProtKB:Q9FG35, ECO:0000250|UniProtKB:Q9LY46}.
CC -!- SUBCELLULAR LOCATION: Golgi apparatus membrane
CC {ECO:0000269|PubMed:21124849}; Single-pass type II membrane protein
CC {ECO:0000269|PubMed:21124849}.
CC -!- MISCELLANEOUS: Contains 2 motifs that are conserved in esterases, but
CC it is unlikely that this protein belongs to the catalytically active
CC pectin esterases. {ECO:0000305|PubMed:20657172}.
CC -!- SIMILARITY: Belongs to the PC-esterase family. TBL subfamily.
CC {ECO:0000305}.
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DR EMBL; AC004683; AAC28772.2; -; Genomic_DNA.
DR EMBL; CP002685; AEC09523.1; -; Genomic_DNA.
DR EMBL; AF370310; AAK44125.1; -; mRNA.
DR PIR; T02513; T02513.
DR RefSeq; NP_565888.1; NM_129388.3.
DR AlphaFoldDB; O80919; -.
DR SMR; O80919; -.
DR STRING; 3702.AT2G38320.1; -.
DR PaxDb; O80919; -.
DR PRIDE; O80919; -.
DR ProteomicsDB; 232992; -.
DR EnsemblPlants; AT2G38320.1; AT2G38320.1; AT2G38320.
DR GeneID; 818412; -.
DR Gramene; AT2G38320.1; AT2G38320.1; AT2G38320.
DR KEGG; ath:AT2G38320; -.
DR Araport; AT2G38320; -.
DR TAIR; locus:2057145; AT2G38320.
DR eggNOG; ENOG502QTH8; Eukaryota.
DR HOGENOM; CLU_020953_3_1_1; -.
DR InParanoid; O80919; -.
DR OMA; LFFMTMS; -.
DR OrthoDB; 886886at2759; -.
DR PhylomeDB; O80919; -.
DR PRO; PR:O80919; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; O80919; baseline and differential.
DR Genevisible; O80919; AT.
DR GO; GO:0005794; C:Golgi apparatus; IDA:TAIR.
DR GO; GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0016413; F:O-acetyltransferase activity; IBA:GO_Central.
DR GO; GO:1990538; F:xylan O-acetyltransferase activity; IMP:TAIR.
DR GO; GO:0045492; P:xylan biosynthetic process; IMP:TAIR.
DR InterPro; IPR026057; PC-Esterase.
DR InterPro; IPR029962; TBL.
DR InterPro; IPR029971; TBL34.
DR InterPro; IPR025846; TBL_N.
DR PANTHER; PTHR32285; PTHR32285; 1.
DR PANTHER; PTHR32285:SF306; PTHR32285:SF306; 1.
DR Pfam; PF13839; PC-Esterase; 1.
DR Pfam; PF14416; PMR5N; 1.
PE 2: Evidence at transcript level;
KW Golgi apparatus; Membrane; Reference proteome; Signal-anchor;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..410
FT /note="Protein trichome birefringence-like 34"
FT /id="PRO_0000425399"
FT TRANSMEM 13..33
FT /note="Helical; Signal-anchor for type II membrane protein"
FT /evidence="ECO:0000255"
FT MOTIF 133..135
FT /note="GDS motif"
FT MOTIF 383..397
FT /note="DCXHWCLPGXXDXWN motif"
SQ SEQUENCE 410 AA; 47657 MW; E9399B2A84E7A714 CRC64;
MAKRQLLMLG IRTSFHTIAA VLVAGLIFTA VFLSRNSLPK ENPQSHGVTD RGGDSGRECN
LFEGKWVFDN VSYPLYKEED CKFMSDQLAC EKFGRKDLSY KFWRWQPHTC DLPRFNGTKL
LERLRNKRMV YVGDSLNRGQ WVSMVCMVSS VITNPKAMYM HNNGSNLITF KALEYNATID
YYWAPLLVES NSDDPTNHRF PDRIVRIQSI EKHARHWTNS DIIVFNSYLW WRMPHIKSLW
GSFEKLDGIY KEVEMVRVYE MALQTLSQWL EVHVNPNITK LFFMSMSPTH ERAEEWGGIL
NQNCYGEASL IDKEGYTGRG SDPKMMRVLE NVLDGLKNRG LNMQMINITQ LSEYRKEGHP
SIYRKQWGTV KENEISNPSS NADCIHWCLP GVPDVWNELL YAYILDHHSS
