TBL9_ARATH
ID TBL9_ARATH Reviewed; 413 AA.
AC Q9FFZ4; Q9ASZ0;
DT 19-FEB-2014, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 98.
DE RecName: Full=Protein trichome birefringence-like 9;
GN Name=TBL9; OrderedLocusNames=At5g06230; ORFNames=MBL20.11;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RA Kaneko T., Katoh T., Asamizu E., Sato S., Nakamura Y., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. XI.";
RL Submitted (JUN-2000) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 15-413.
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP GENE FAMILY.
RC STRAIN=cv. Columbia;
RX PubMed=17316173; DOI=10.1111/j.1365-313x.2006.02994.x;
RA Xin Z., Mandaokar A., Chen J., Last R.L., Browse J.;
RT "Arabidopsis ESK1 encodes a novel regulator of freezing tolerance.";
RL Plant J. 49:786-799(2007).
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=20388664; DOI=10.1104/pp.110.153320;
RA Bischoff V., Nita S., Neumetzler L., Schindelasch D., Urbain A., Eshed R.,
RA Persson S., Delmer D., Scheible W.R.;
RT "TRICHOME BIREFRINGENCE and its homolog AT5G01360 encode plant-specific
RT DUF231 proteins required for cellulose biosynthesis in Arabidopsis.";
RL Plant Physiol. 153:590-602(2010).
RN [6]
RP 3D-STRUCTURE MODELING.
RX PubMed=20657172; DOI=10.4161/psb.5.8.12414;
RA Bischoff V., Selbig J., Scheible W.R.;
RT "Involvement of TBL/DUF231 proteins into cell wall biology.";
RL Plant Signal. Behav. 5:1057-1059(2010).
CC -!- FUNCTION: May act as a bridging protein that binds pectin and other
CC cell wall polysaccharides. Probably involved in maintaining
CC esterification of pectins (By similarity). May be involved in the
CC specific O-acetylation of cell wall polymers (By similarity).
CC {ECO:0000250|UniProtKB:Q9FG35, ECO:0000250|UniProtKB:Q9LY46}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass type II
CC membrane protein {ECO:0000305}.
CC -!- MISCELLANEOUS: Contains 2 motifs that are conserved in esterases, but
CC it is unlikely that this protein belongs to the catalytically active
CC pectin esterases. {ECO:0000305|PubMed:20657172}.
CC -!- SIMILARITY: Belongs to the PC-esterase family. TBL subfamily.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAK32759.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
CC Sequence=AED90988.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
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DR EMBL; AP002544; BAB09688.1; -; Genomic_DNA.
DR EMBL; CP002688; AED90987.1; -; Genomic_DNA.
DR EMBL; CP002688; AED90988.1; ALT_INIT; Genomic_DNA.
DR EMBL; AF361591; AAK32759.1; ALT_INIT; mRNA.
DR EMBL; AY133558; AAM91388.1; -; mRNA.
DR RefSeq; NP_568164.2; NM_120705.3.
DR RefSeq; NP_974739.1; NM_203010.1.
DR AlphaFoldDB; Q9FFZ4; -.
DR SMR; Q9FFZ4; -.
DR iPTMnet; Q9FFZ4; -.
DR PaxDb; Q9FFZ4; -.
DR PRIDE; Q9FFZ4; -.
DR ProteomicsDB; 234247; -.
DR EnsemblPlants; AT5G06230.1; AT5G06230.1; AT5G06230.
DR GeneID; 830510; -.
DR Gramene; AT5G06230.1; AT5G06230.1; AT5G06230.
DR KEGG; ath:AT5G06230; -.
DR Araport; AT5G06230; -.
DR TAIR; locus:2160717; AT5G06230.
DR eggNOG; ENOG502QSSZ; Eukaryota.
DR InParanoid; Q9FFZ4; -.
DR OrthoDB; 515722at2759; -.
DR PhylomeDB; Q9FFZ4; -.
DR PRO; PR:Q9FFZ4; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FFZ4; baseline and differential.
DR GO; GO:0005794; C:Golgi apparatus; IBA:GO_Central.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0016413; F:O-acetyltransferase activity; IBA:GO_Central.
DR InterPro; IPR026057; PC-Esterase.
DR InterPro; IPR029962; TBL.
DR InterPro; IPR029977; TBL8-9.
DR InterPro; IPR025846; TBL_N.
DR PANTHER; PTHR32285; PTHR32285; 1.
DR PANTHER; PTHR32285:SF210; PTHR32285:SF210; 1.
DR Pfam; PF13839; PC-Esterase; 1.
DR Pfam; PF14416; PMR5N; 1.
PE 2: Evidence at transcript level;
KW Membrane; Reference proteome; Signal-anchor; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..413
FT /note="Protein trichome birefringence-like 9"
FT /id="PRO_0000425375"
FT TRANSMEM 22..42
FT /note="Helical; Signal-anchor for type II membrane protein"
FT /evidence="ECO:0000255"
FT MOTIF 141..143
FT /note="GDS motif"
FT MOTIF 384..398
FT /note="DCXHWCLPGXXDXWN motif"
SQ SEQUENCE 413 AA; 48140 MW; 577B63F83A4B948A CRC64;
MDHHQLFSLC SFSYIFKIKK HLFVSLFLLS LLIFSTVVVD VMPSLRIGLL SSSSSQTVTK
ECDYSKGKWV RRASSSSSSV NGLFYGEECR FLDSGFRCHK HGRKDSGYLD WRWQPHGCDL
PRFNASDLLE RSRNGRIVFV GDSIGRNQWE SLMCMLSQAI PNKSEIYEVN GNPITKHKGF
LSMRFPRENL TVEYHRSPFL VVIGRPPDKS PKEIKTTVRV DEFNWQSKRW VGSDVLVFNS
GHWWNEDKTV LTGCYFEEGR KVNKTMGVME AFGKSLKTWK SWVLEKLDPD KSYVFFRSYS
PVHYRNGTWN TGGLCDAEIE PETDKRKLEP DASHNEYIYK VIEEMRYRHS KVKFLNITYL
TEFRKDGHIS RYREQGTSVD VPQDCSHWCL PGVPDTWNEI LYAQLLSMNY RTK
