TBX2B_XENLA
ID TBX2B_XENLA Reviewed; 691 AA.
AC Q6PCL0;
DT 28-NOV-2006, integrated into UniProtKB/Swiss-Prot.
DT 20-APR-2010, sequence version 2.
DT 03-AUG-2022, entry version 75.
DE RecName: Full=T-box transcription factor TBX2-B;
DE Short=T-box protein 2-B;
GN Name=tbx2-b;
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8355;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (OCT-2003) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Transcription factor which acts as a transcriptional
CC repressor (By similarity). May also function as a transcriptional
CC activator (By similarity). Binds to the palindromic T site 5'-
CC TTCACACCTAGGTGTGAA-3' DNA sequence, or a half-site, which are present
CC in the regulatory region of several genes (By similarity).
CC {ECO:0000250|UniProtKB:Q13207, ECO:0000250|UniProtKB:Q60707}.
CC -!- SUBUNIT: Binds DNA as a monomer. {ECO:0000250|UniProtKB:Q13207}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:Q13207}.
CC -!- DOMAIN: Repression domain 1 (RD1) is involved in transcriptional
CC repression. {ECO:0000250|UniProtKB:Q13207}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAH59285.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
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DR EMBL; BC059285; AAH59285.1; ALT_INIT; mRNA.
DR RefSeq; NP_001079989.1; NM_001086520.1.
DR AlphaFoldDB; Q6PCL0; -.
DR SMR; Q6PCL0; -.
DR DNASU; 379680; -.
DR GeneID; 379680; -.
DR KEGG; xla:379680; -.
DR CTD; 379680; -.
DR Xenbase; XB-GENE-6255176; tbx2.S.
DR OrthoDB; 301173at2759; -.
DR Proteomes; UP000186698; Chromosome 2S.
DR Bgee; 379680; Expressed in internal ear and 14 other tissues.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IEA:InterPro.
DR CDD; cd00182; TBOX; 1.
DR Gene3D; 2.60.40.820; -; 1.
DR InterPro; IPR008967; p53-like_TF_DNA-bd.
DR InterPro; IPR046360; T-box_DNA-bd.
DR InterPro; IPR036960; T-box_sf.
DR InterPro; IPR022582; TBX2/3_TAD.
DR InterPro; IPR002070; TF_Brachyury.
DR InterPro; IPR001699; TF_T-box.
DR InterPro; IPR018186; TF_T-box_CS.
DR PANTHER; PTHR11267; PTHR11267; 1.
DR Pfam; PF00907; T-box; 1.
DR Pfam; PF12598; TBX; 1.
DR PRINTS; PR00938; BRACHYURY.
DR PRINTS; PR00937; TBOX.
DR SMART; SM00425; TBOX; 1.
DR SUPFAM; SSF49417; SSF49417; 1.
DR PROSITE; PS01283; TBOX_1; 1.
DR PROSITE; PS01264; TBOX_2; 1.
DR PROSITE; PS50252; TBOX_3; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..691
FT /note="T-box transcription factor TBX2-B"
FT /id="PRO_0000262465"
FT DNA_BIND 104..277
FT /note="T-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00201"
FT REGION 301..440
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 612..691
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 659..684
FT /evidence="ECO:0000255"
FT COMPBIAS 337..365
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 375..401
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 413..435
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 614..640
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 656..670
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 691 AA; 75565 MW; 965BD4B5CEFE0C23 CRC64;
MRDPAFPGAA MAYHPFHAPR PADFPMSAFL AAAQPSFFPA LTLPPAALGK PLSDPSLAGA
AEAGLHLSAL GHHHQAAHLR SLKSLEPEEE VDDDPKVNLE AKELWDQFHK IGTEMVITKS
GRRMFPPFKV RVSGLDKKAK YILLMDIVAA DDCRYKFHNS RWMVAGKADP EMPKRMYIHP
DSPATGEQWM AKPVAFHKLK LTNNISDKHG FTILNSMHKY QPRFHIVRAN DILKLPYSTF
RTYVFPETDF IAVTAYQNDK ITQLKIDHNP FAKGFRDTGN GRREKRKQLS LPSLRMYEEQ
CKADRDGAES DASSCDPAPG RDSLHSPLSA APSPLRLHRT NREEKFGADS DQELDRREVR
SARGHSPVGH RSPPSSPRLE DRGKDKSTPE KKSDSPESRK DGGSGGDSLF NSIRSLEKDK
VESRRKEDSK SDPECGSLSK ETYSPLMVQT ESPPHLSASH LQSLAFSGLH GQQFFNPLNA
GQPLFFHPGQ FTMGPGAFSA MGMGHLLASM TGAGALDNGS LSSVQGASGA ATPFPFHLSQ
HMLASQGIPM PAFGGLFPYP YTYMAAAAAA ASAMPATSAA TTMPRNPFLS STRPRLRFNP
YQIPVGIPPC SNLLTTGMPG SINPGSESSK PGSSRESSPI PDTPGHKRSH SKSLSPKASM
KDSINELQRI QRLVSGLERQ REVSPGRESP K