TBX6L_CHICK
ID TBX6L_CHICK Reviewed; 361 AA.
AC P79779;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-1997, sequence version 1.
DT 03-AUG-2022, entry version 117.
DE RecName: Full=T-box-containing protein TBX6L;
DE Flags: Fragment;
GN Name=TBX6L;
OS Gallus gallus (Chicken).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Phasianinae; Gallus.
OX NCBI_TaxID=9031;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=White leghorn; TISSUE=Embryo;
RX PubMed=9053317; DOI=10.1242/dev.124.2.411;
RA Knezevic V., de Santo R., Mackem S.;
RT "Two novel chick T-box genes related to mouse Brachyury are expressed in
RT different, non-overlapping mesodermal domains during gastrulation.";
RL Development 124:411-419(1997).
CC -!- FUNCTION: May be involved in regulating somitogenesis.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00201}.
CC -!- DEVELOPMENTAL STAGE: First detected in stage X-XI blastoderms in the
CC posterior epiblast. At stage 4, detected in the ectoderm around the
CC primitive streak and in later stages, expressed exclusively within the
CC mesoderm of the segmental plate. Expression continues here beyond trunk
CC and tail bud formation and disappears by stage 26-28.
CC -!- INDUCTION: By FGF-4, activin and retinoic acid.
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DR EMBL; U67088; AAC60073.1; -; mRNA.
DR AlphaFoldDB; P79779; -.
DR SMR; P79779; -.
DR STRING; 9031.ENSGALP00000010286; -.
DR PaxDb; P79779; -.
DR VEuPathDB; HostDB:geneid_395792; -.
DR eggNOG; KOG3585; Eukaryota.
DR InParanoid; P79779; -.
DR Proteomes; UP000000539; Unplaced.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0003205; P:cardiac chamber development; IBA:GO_Central.
DR GO; GO:0001708; P:cell fate specification; IBA:GO_Central.
DR GO; GO:0007417; P:central nervous system development; IBA:GO_Central.
DR GO; GO:0001947; P:heart looping; IBA:GO_Central.
DR GO; GO:0008284; P:positive regulation of cell population proliferation; IBA:GO_Central.
DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IEA:InterPro.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR CDD; cd00182; TBOX; 1.
DR Gene3D; 2.60.40.820; -; 1.
DR InterPro; IPR008967; p53-like_TF_DNA-bd.
DR InterPro; IPR046360; T-box_DNA-bd.
DR InterPro; IPR036960; T-box_sf.
DR InterPro; IPR001699; TF_T-box.
DR InterPro; IPR018186; TF_T-box_CS.
DR PANTHER; PTHR11267; PTHR11267; 2.
DR Pfam; PF00907; T-box; 1.
DR PRINTS; PR00937; TBOX.
DR SMART; SM00425; TBOX; 1.
DR SUPFAM; SSF49417; SSF49417; 1.
DR PROSITE; PS01283; TBOX_1; 1.
DR PROSITE; PS01264; TBOX_2; 1.
DR PROSITE; PS50252; TBOX_3; 1.
PE 2: Evidence at transcript level;
KW Developmental protein; DNA-binding; Nucleus; Reference proteome;
KW Transcription; Transcription regulation.
FT CHAIN 1..>361
FT /note="T-box-containing protein TBX6L"
FT /id="PRO_0000184464"
FT DNA_BIND 36..209
FT /note="T-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00201"
FT REGION 203..259
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 280..323
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 203..223
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 230..258
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 299..316
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 361
SQ SEQUENCE 361 AA; 41186 MW; 566756AE2419A128 CRC64;
MQVLPDIKAP CDALASPSLE PYPQSSITVT LEDMGLWMKF HQIGTEMIIT KSGRRMFPQC
KIKVSGLIPY AKYLMLVDFV PVDNFRYKWN KDQWEVAGKA EPQLPCRTYV HPDSPAPGSH
WMKEPVSFQK LKLTNNTLDQ HGHIILHSMH RYKPRFHIVQ ADDLFSVRWS IFQVFSFPET
VFTSVTAYQN EQITKLKIDN NPFAKGFREH GKNTRREGRA KSQKPSPAKG QKRKLPEEKE
SGAEERDFEK DENVDVKEES NPIVVSSGYP FWISEQNSSH AFPAASPAPA EQREGPAREQ
QVPTPSYQTY RFHEAGDSQQ LPSRDVAALN DFRGRCHPLD LATVPEHDSK QLPEGFTNLP
P