TCAL1_RAT
ID TCAL1_RAT Reviewed; 165 AA.
AC Q5PPP3;
DT 30-MAY-2006, integrated into UniProtKB/Swiss-Prot.
DT 04-JAN-2005, sequence version 1.
DT 03-AUG-2022, entry version 101.
DE RecName: Full=Transcription elongation factor A protein-like 1 {ECO:0000305};
DE Short=TCEA-like protein 1;
DE AltName: Full=Transcription elongation factor S-II protein-like 1;
GN Name=Tceal1 {ECO:0000312|RGD:1549724};
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Ovary;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- FUNCTION: May be involved in transcriptional regulation. Modulates
CC various viral and cellular promoters in a promoter context-dependent
CC manner. Does not bind DNA directly (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the TFS-II family. TFA subfamily. {ECO:0000305}.
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DR EMBL; BC087575; AAH87575.1; -; mRNA.
DR RefSeq; NP_001009675.1; NM_001009675.1.
DR RefSeq; XP_008771635.1; XM_008773413.2.
DR RefSeq; XP_008771636.1; XM_008773414.1.
DR AlphaFoldDB; Q5PPP3; -.
DR BioGRID; 257245; 1.
DR STRING; 10116.ENSRNOP00000049958; -.
DR PaxDb; Q5PPP3; -.
DR Ensembl; ENSRNOT00000044372; ENSRNOP00000049958; ENSRNOG00000002387.
DR Ensembl; ENSRNOT00000103148; ENSRNOP00000087064; ENSRNOG00000002387.
DR GeneID; 302593; -.
DR KEGG; rno:302593; -.
DR UCSC; RGD:1549724; rat.
DR CTD; 9338; -.
DR RGD; 1549724; Tceal1.
DR eggNOG; ENOG502TCYF; Eukaryota.
DR GeneTree; ENSGT00950000183164; -.
DR HOGENOM; CLU_140430_0_0_1; -.
DR InParanoid; Q5PPP3; -.
DR OMA; RPPQECL; -.
DR OrthoDB; 1545661at2759; -.
DR PhylomeDB; Q5PPP3; -.
DR TreeFam; TF336871; -.
DR PRO; PR:Q5PPP3; -.
DR Proteomes; UP000002494; Chromosome X.
DR Bgee; ENSRNOG00000002387; Expressed in cerebellum and 19 other tissues.
DR Genevisible; Q5PPP3; RN.
DR GO; GO:0005634; C:nucleus; ISO:RGD.
DR GO; GO:0050699; F:WW domain binding; IBA:GO_Central.
DR InterPro; IPR010370; TCEAL1.
DR InterPro; IPR021156; TF_A-like/BEX.
DR PANTHER; PTHR14754:SF12; PTHR14754:SF12; 1.
DR Pfam; PF04538; BEX; 1.
PE 2: Evidence at transcript level;
KW Nucleus; Reference proteome; Transcription; Transcription regulation.
FT CHAIN 1..165
FT /note="Transcription elongation factor A protein-like 1"
FT /id="PRO_0000239205"
FT REGION 1..66
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 89..124
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..16
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 17..34
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 35..59
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 98..124
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 165 AA; 19262 MW; 6DCDBF4D1BF2B341 CRC64;
MENSHNESEE QPQSTPKVEE EQPAVEQSPE NQCSEDDQSS EDLSSEEQSS DEEFFPEELL
PELLPEMLLC EDRPPQECLP QKNAFEDRIP MEQPPCGIGK HKLEEGSFKE RLARSRPQFR
GDIHGRNLSN EEMIRAADEL EEMKRVRNKL MIMHWKAKRS RPYPI
