TCF19_PIG
ID TCF19_PIG Reviewed; 346 AA.
AC Q9TSV4; O19083;
DT 16-FEB-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 110.
DE RecName: Full=Transcription factor 19;
DE Short=TCF-19;
DE AltName: Full=Transcription factor SC1;
GN Name=TCF19; Synonyms=SC1;
OS Sus scrofa (Pig).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus.
OX NCBI_TaxID=9823;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Large white; TISSUE=Fibroblast;
RX PubMed=11169259; DOI=10.1034/j.1399-0039.2001.057001055.x;
RA Chardon P., Rogel-Gaillard C., Cattolico L., Duprat S., Vaiman M.,
RA Renard C.;
RT "Sequence of the swine major histocompatibility complex region containing
RT all non-classical class I genes.";
RL Tissue Antigens 57:55-65(2001).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 138-218.
RC TISSUE=Peripheral blood;
RX PubMed=9510374; DOI=10.1111/j.1399-0039.1998.tb02963.x;
RA Velten F., Rogel-Gaillard C., Renard C., Vaiman M., Chardon P.;
RT "A first map of the porcine major histocompatibility complex class I
RT region.";
RL Tissue Antigens 51:183-194(1998).
CC -!- FUNCTION: Potential trans-activating factor that could play an
CC important role in the transcription of genes required for the later
CC stages of cell cycle progression. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
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DR EMBL; AJ251914; CAB63863.1; -; Genomic_DNA.
DR EMBL; Z97401; CAB10689.1; -; Genomic_DNA.
DR RefSeq; NP_001161063.1; NM_001167591.1.
DR RefSeq; XP_005665811.1; XM_005665754.2.
DR AlphaFoldDB; Q9TSV4; -.
DR SMR; Q9TSV4; -.
DR STRING; 9823.ENSSSCP00000030891; -.
DR PaxDb; Q9TSV4; -.
DR PRIDE; Q9TSV4; -.
DR Ensembl; ENSSSCT00070048510; ENSSSCP00070040962; ENSSSCG00070024292.
DR GeneID; 100152381; -.
DR KEGG; ssc:100152381; -.
DR CTD; 6941; -.
DR eggNOG; ENOG502RHCY; Eukaryota.
DR HOGENOM; CLU_041089_0_0_1; -.
DR InParanoid; Q9TSV4; -.
DR OMA; SGAGCTY; -.
DR OrthoDB; 1106192at2759; -.
DR TreeFam; TF334697; -.
DR Proteomes; UP000008227; Unplaced.
DR Proteomes; UP000314985; Chromosome 7.
DR Genevisible; Q9TSV4; SS.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0010468; P:regulation of gene expression; IBA:GO_Central.
DR CDD; cd00060; FHA; 1.
DR CDD; cd15609; PHD_TCF19; 1.
DR Gene3D; 3.30.40.10; -; 1.
DR InterPro; IPR000253; FHA_dom.
DR InterPro; IPR008984; SMAD_FHA_dom_sf.
DR InterPro; IPR042803; TCF19.
DR InterPro; IPR039095; TCF19_PHD.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR15464; PTHR15464; 2.
DR Pfam; PF00498; FHA; 1.
DR SMART; SM00240; FHA; 1.
DR SMART; SM00249; PHD; 1.
DR SUPFAM; SSF49879; SSF49879; 1.
DR SUPFAM; SSF57903; SSF57903; 1.
DR PROSITE; PS50006; FHA_DOMAIN; 1.
DR PROSITE; PS01359; ZF_PHD_1; 1.
PE 3: Inferred from homology;
KW Metal-binding; Nucleus; Phosphoprotein; Reference proteome; Transcription;
KW Transcription regulation; Zinc; Zinc-finger.
FT CHAIN 1..346
FT /note="Transcription factor 19"
FT /id="PRO_0000059329"
FT DOMAIN 31..88
FT /note="FHA"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00086"
FT ZN_FING 297..340
FT /note="PHD-type"
FT REGION 136..168
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 190..289
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 190..212
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 226..243
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 78
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:Q9Y242"
SQ SEQUENCE 346 AA; 37539 MW; DEAFECB18BFE5964 CRC64;
MLPCFQLLRI GGGRGVDLYT FHPPSGAGCT YRLGCRADLC DVALRPQQEP GFISEVHAEL
HAERRGDDWR VSLEDHSSQG TLVNNVRLPR GHRLELSDGD LLTFGPEGPP GTSPSEFYMF
QQVRVKPQDF AAITIPRSRG EEGETRAGFR PMLPSQGAPQ RPLSTLSPTP KATLILNSIG
SLSKLHLQPL TFSRSGSGPQ NPPVSTTPGE VRTTPSAPPP RNRRKSAHRV LAELDDEREA
PESLPPVLIE PRKKLLRVEK TPPTPSGNRR GRPRKHPVSI PRAPPAAGGG EPCAAPCCCL
PQEETVAWVQ CDGCDTWFHV ACVGCSIQAA KEADFRCPGC RVGIQS