TCHP_DANRE
ID TCHP_DANRE Reviewed; 499 AA.
AC Q1RM03; Q502P3;
DT 26-JUN-2007, integrated into UniProtKB/Swiss-Prot.
DT 16-MAY-2006, sequence version 1.
DT 03-AUG-2022, entry version 83.
DE RecName: Full=Trichoplein keratin filament-binding protein;
DE Short=Protein TCHP;
GN Name=tchp {ECO:0000312|EMBL:AAI15205.1,
GN ECO:0000312|ZFIN:ZDB-GENE-060421-3368}; ORFNames=zgc:136634;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen;
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M.,
RA Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I.,
RA Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.,
RA White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y.,
RA Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B.,
RA Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S.,
RA Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S.,
RA Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N.,
RA Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J.,
RA Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J.,
RA Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D.,
RA McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S.,
RA Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E.,
RA Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A.,
RA Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P.,
RA Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C.,
RA Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C.,
RA Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M.,
RA Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C., Raddatz G.,
RA Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F.,
RA Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M.,
RA Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M.,
RA de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C.,
RA Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the human
RT genome.";
RL Nature 496:498-503(2013).
RN [2] {ECO:0000312|EMBL:CAM15569.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Larva {ECO:0000312|EMBL:AAH95618.1};
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: May act as a 'capping' or 'branching' protein for keratin
CC filaments in the cell periphery. May regulate K8/K18 filament and
CC desmosome organization mainly at the apical or peripheral regions of
CC simple epithelial cells (By similarity).
CC {ECO:0000250|UniProtKB:Q9BT92}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm, cytoskeleton {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the TCHP family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAH95618.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence. Potential poly-A sequence starting in position 264.; Evidence={ECO:0000305};
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DR EMBL; BX323811; CAM15569.1; -; Genomic_DNA.
DR EMBL; BC095618; AAH95618.1; ALT_SEQ; mRNA.
DR EMBL; BC115204; AAI15205.1; -; mRNA.
DR RefSeq; NP_001035433.1; NM_001040343.1.
DR AlphaFoldDB; Q1RM03; -.
DR SMR; Q1RM03; -.
DR STRING; 7955.ENSDARP00000051613; -.
DR PaxDb; Q1RM03; -.
DR PRIDE; Q1RM03; -.
DR Ensembl; ENSDART00000051614; ENSDARP00000051613; ENSDARG00000035605.
DR GeneID; 678595; -.
DR KEGG; dre:678595; -.
DR CTD; 84260; -.
DR ZFIN; ZDB-GENE-060421-3368; tchp.
DR eggNOG; ENOG502QVSH; Eukaryota.
DR GeneTree; ENSGT01050000245079; -.
DR HOGENOM; CLU_042533_1_0_1; -.
DR InParanoid; Q1RM03; -.
DR OMA; QNSHYFR; -.
DR OrthoDB; 675049at2759; -.
DR PhylomeDB; Q1RM03; -.
DR TreeFam; TF329032; -.
DR PRO; PR:Q1RM03; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Chromosome 5.
DR Bgee; ENSDARG00000035605; Expressed in testis and 20 other tissues.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0045095; C:keratin filament; IBA:GO_Central.
DR GO; GO:0006915; P:apoptotic process; IBA:GO_Central.
DR InterPro; IPR043596; CFAP53/TCHP.
DR InterPro; IPR026773; TCHP.
DR InterPro; IPR043597; TPH_dom.
DR PANTHER; PTHR31183; PTHR31183; 1.
DR PANTHER; PTHR31183:SF2; PTHR31183:SF2; 1.
DR Pfam; PF13868; TPH; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Cytoplasm; Cytoskeleton; Reference proteome.
FT CHAIN 1..499
FT /note="Trichoplein keratin filament-binding protein"
FT /id="PRO_0000292612"
FT REGION 46..78
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 74..499
FT /note="Interaction with keratin proteins"
FT /evidence="ECO:0000250|UniProtKB:Q9BT92"
FT REGION 169..209
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 260..426
FT /note="Trichohyalin/plectin homology domain"
FT /evidence="ECO:0000250|UniProtKB:Q9BT92"
FT COILED 12..38
FT /evidence="ECO:0000255"
FT COILED 71..133
FT /evidence="ECO:0000255"
FT COILED 168..306
FT /evidence="ECO:0000255"
FT COILED 359..484
FT /evidence="ECO:0000255"
FT COMPBIAS 46..64
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 173..209
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 261..263
FT /note="MME -> ISD (in Ref. 2; AAH95618)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 499 AA; 62351 MW; 49B2771596B68D5B CRC64;
MALPTLSAHW PSRVRTLEQQ LVRQREQEAR LRRQWEQHSQ YFREQDVRSS KQAQWSSRQS
FHRSMSAFQR DRMREEKQRK LEERRERLRT MLQEERDQLE AELRNIHPDR DTLARQLVEK
TDALRSAREE RRKNLAQELL REHWKQNNSQ LRKVESELHK DHIVSQWQVQ QQEKKQADER
TQEEKQRFEN EYERTRQEAL ERMRKEEENR KWEEKKRAEE LLKQMEELKL REQEAERLKQ
EQETLMSKRW ELEKLEDERK MMEESRRKTE FGRFLTRQYR AQLKRRAQQV QEELEADRKI
LAALLEGELD EQRFHKARRE RAVADAAWMK RVIEEQLQLE REREAEFDIL YREEAQRVWE
KREAEWEKER RARERLMREV LAGRQQQLQE RMQENRLARE ESLQRREELL QQLEQDRLTL
RLEKEQQEGL RTARIQEIDN QVEQRRKEQW EQQQTLEQEE AQEREELRLQ EEELRLETDR
MIRQGFQERI HSRPRSAWT