TCP11_ARATH
ID TCP11_ARATH Reviewed; 188 AA.
AC Q9SJK7;
DT 29-APR-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 104.
DE RecName: Full=Transcription factor TCP11;
GN Name=TCP11; OrderedLocusNames=At2g37000; ORFNames=T1J8.18;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Shinn P., Chen H., Cheuk R.F., Kim C.J., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (JAN-2004) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=17307924; DOI=10.1105/tpc.106.048934;
RA Aguilar-Martinez J.A., Poza-Carrion C., Cubas P.;
RT "Arabidopsis BRANCHED1 acts as an integrator of branching signals within
RT axillary buds.";
RL Plant Cell 19:458-472(2007).
RN [5]
RP INTERACTION WITH SPL.
RX PubMed=25527103; DOI=10.1016/j.jgg.2014.08.009;
RA Chen G.H., Sun J.Y., Liu M., Liu J., Yang W.C.;
RT "SPOROCYTELESS is a novel embryophyte-specific transcription repressor that
RT interacts with TPL and TCP proteins in Arabidopsis.";
RL J. Genet. Genomics 41:617-625(2014).
CC -!- SUBUNIT: Interacts with SPL. {ECO:0000269|PubMed:25527103}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
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DR EMBL; AC006922; AAD31585.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC09333.1; -; Genomic_DNA.
DR EMBL; BT010700; AAR20757.1; -; mRNA.
DR EMBL; BT011504; AAS00344.1; -; mRNA.
DR PIR; C84787; C84787.
DR RefSeq; NP_181237.1; NM_129256.3.
DR AlphaFoldDB; Q9SJK7; -.
DR SMR; Q9SJK7; -.
DR BioGRID; 3618; 21.
DR STRING; 3702.AT2G37000.1; -.
DR PaxDb; Q9SJK7; -.
DR PRIDE; Q9SJK7; -.
DR EnsemblPlants; AT2G37000.1; AT2G37000.1; AT2G37000.
DR GeneID; 818274; -.
DR Gramene; AT2G37000.1; AT2G37000.1; AT2G37000.
DR KEGG; ath:AT2G37000; -.
DR Araport; AT2G37000; -.
DR TAIR; locus:2057911; AT2G37000.
DR eggNOG; ENOG502RZSX; Eukaryota.
DR HOGENOM; CLU_112232_0_0_1; -.
DR InParanoid; Q9SJK7; -.
DR OMA; QPAGMDY; -.
DR OrthoDB; 1502072at2759; -.
DR PhylomeDB; Q9SJK7; -.
DR PRO; PR:Q9SJK7; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q9SJK7; baseline and differential.
DR Genevisible; Q9SJK7; AT.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR GO; GO:0043565; F:sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0007623; P:circadian rhythm; IMP:TAIR.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; TAS:TAIR.
DR InterPro; IPR017887; TF_TCP_subgr.
DR InterPro; IPR005333; Transcription_factor_TCP.
DR PANTHER; PTHR31072; PTHR31072; 1.
DR Pfam; PF03634; TCP; 1.
DR PROSITE; PS51369; TCP; 1.
PE 1: Evidence at protein level;
KW DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..188
FT /note="Transcription factor TCP11"
FT /id="PRO_0000330785"
FT DOMAIN 43..97
FT /note="TCP"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00701"
FT REGION 26..53
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 115..136
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 188 AA; 20682 MW; 22043D63A7825889 CRC64;
MIFQNVCRNE SNFNAIASES RSQTQFGVSK SSSSGGGCIS ARTKDRHTKV NGRSRRVTMP
ALAAARIFQL TRELGHKTEG ETIEWLLSQA EPSIIAATGY GTKLISNWVD VAADDSSSSS
SMTSPQTQTQ TPQSPSCRLD LCQPIGIQYP VNGYSHMPFT AMLLEPMTTT AESEVEIAEE
EERRRRHH