TCTP_ORYSJ
ID TCTP_ORYSJ Reviewed; 168 AA.
AC P35681; Q2R036;
DT 01-JUN-1994, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-1994, sequence version 1.
DT 03-AUG-2022, entry version 116.
DE RecName: Full=Translationally-controlled tumor protein homolog;
DE Short=TCTP;
GN Name=TCTP; OrderedLocusNames=Os11g0660500, LOC_Os11g43900;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC TISSUE=Callus;
RA Nishi R., Uchimiya H., Kato A.;
RT "A Oryza sativa cDNA clone homologous to human translationary controlled
RT tumor protein.";
RL Submitted (JUL-1992) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16188032; DOI=10.1186/1741-7007-3-20;
RG The rice chromosomes 11 and 12 sequencing consortia;
RT "The sequence of rice chromosomes 11 and 12, rich in disease resistance
RT genes and recent gene duplications.";
RL BMC Biol. 3:20-20(2005).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [6]
RP PROTEIN SEQUENCE OF 1-10.
RC STRAIN=cv. Nipponbare; TISSUE=Anther, Embryo, and Panicle;
RX PubMed=14681440; DOI=10.1093/nar/gkh020;
RA Komatsu S., Kojima K., Suzuki K., Ozaki K., Higo K.;
RT "Rice proteome database based on two-dimensional polyacrylamide gel
RT electrophoresis: its status in 2003.";
RL Nucleic Acids Res. 32:D388-D392(2004).
CC -!- FUNCTION: Involved in calcium binding and microtubule stabilization.
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the TCTP family. {ECO:0000255|PROSITE-
CC ProRule:PRU01133}.
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DR EMBL; D12626; BAA02151.1; -; mRNA.
DR EMBL; DP000010; ABA95199.1; -; Genomic_DNA.
DR EMBL; AP008217; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AP014967; BAT15135.1; -; Genomic_DNA.
DR PIR; A38958; A38958.
DR RefSeq; XP_015617060.1; XM_015761574.1.
DR AlphaFoldDB; P35681; -.
DR SMR; P35681; -.
DR STRING; 4530.OS11T0660500-01; -.
DR PaxDb; P35681; -.
DR PRIDE; P35681; -.
DR EnsemblPlants; Os11t0660500-01; Os11t0660500-01; Os11g0660500.
DR GeneID; 4351061; -.
DR Gramene; Os11t0660500-01; Os11t0660500-01; Os11g0660500.
DR KEGG; osa:4351061; -.
DR eggNOG; KOG1727; Eukaryota.
DR HOGENOM; CLU_095877_1_1_1; -.
DR InParanoid; P35681; -.
DR OMA; IVYEADC; -.
DR OrthoDB; 1439384at2759; -.
DR Proteomes; UP000000763; Chromosome 11.
DR Proteomes; UP000059680; Chromosome 11.
DR ExpressionAtlas; P35681; baseline and differential.
DR Genevisible; P35681; OS.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005509; F:calcium ion binding; IBA:GO_Central.
DR Gene3D; 2.170.150.10; -; 1.
DR InterPro; IPR011057; Mss4-like_sf.
DR InterPro; IPR011323; Mss4/transl-control_tumour.
DR InterPro; IPR034737; TCTP.
DR InterPro; IPR018103; Translation_control_tumour_CS.
DR InterPro; IPR018105; Translational_control_tumour_p.
DR PANTHER; PTHR11991; PTHR11991; 1.
DR Pfam; PF00838; TCTP; 1.
DR PRINTS; PR01653; TCTPROTEIN.
DR SUPFAM; SSF51316; SSF51316; 1.
DR PROSITE; PS01002; TCTP_1; 1.
DR PROSITE; PS01003; TCTP_2; 1.
DR PROSITE; PS51797; TCTP_3; 1.
PE 1: Evidence at protein level;
KW Calcium; Cytoplasm; Direct protein sequencing; Reference proteome.
FT CHAIN 1..168
FT /note="Translationally-controlled tumor protein homolog"
FT /id="PRO_0000211304"
FT DOMAIN 1..168
FT /note="TCTP"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01133"
SQ SEQUENCE 168 AA; 18946 MW; FB6B6A2EE047E21C CRC64;
MLVYQDLLTG DELLSDSFPY REIENGILWE VDGKWVVQGA IDVDIGANPS AEGGGDDEGV
DDQAVKVVDI VDTFRLQEQP PFDKKQFVTF MKRYIKNLSA KLDAEKQEEF KKNIEGATKY
LLGKLKDLQF FVGESMHDDG GLVFAYYKDG ATDPTFLYFS HGLKEVKC