TDC1_CAMAC
ID TDC1_CAMAC Reviewed; 502 AA.
AC P93082; A0A1C9CX68;
DT 23-MAY-2018, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-1997, sequence version 1.
DT 03-AUG-2022, entry version 98.
DE RecName: Full=Tryptophan decarboxylase TDC1 {ECO:0000305};
DE EC=4.1.1.105 {ECO:0000269|PubMed:27432874, ECO:0000269|PubMed:9225462};
GN Name=TDC1 {ECO:0000303|PubMed:27432874, ECO:0000303|PubMed:9225462};
OS Camptotheca acuminata (Happy tree).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; Cornales; Nyssaceae; Camptotheca.
OX NCBI_TaxID=16922;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, CATALYTIC ACTIVITY, AND TISSUE
RP SPECIFICITY.
RC TISSUE=Seedling;
RX PubMed=9225462; DOI=10.1046/j.1365-313x.1997.11061167.x;
RA Lopez-Meyer M., Nessler C.L.;
RT "Tryptophan decarboxylase is encoded by two autonomously regulated genes in
RT Camptotheca acuminata which are differentially expressed during development
RT and stress.";
RL Plant J. 11:1167-1175(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, AND CATALYTIC ACTIVITY.
RX PubMed=27432874; DOI=10.1105/tpc.16.00193;
RA Sadre R., Magallanes-Lundback M., Pradhan S., Salim V., Mesberg A.,
RA Jones A.D., DellaPenna D.;
RT "Metabolite diversity in alkaloid biosynthesis: a multilane (diastereomer)
RT highway for camptothecin synthesis in Camptotheca acuminata.";
RL Plant Cell 28:1926-1944(2016).
CC -!- FUNCTION: Involved in the biosynthesis of tryptamine. Supplies
CC tryptamine for the indole moiety of camptothecin (CPT), an anti-cancer
CC monoterpene alkaloid. Represents a key step in monoterpene indole
CC alkaloid biosynthesis. Is specific for tryptophan, and inactive against
CC tyrosine, phenylalanine and 3,4-dihydroxyphenylalanine (dopa).
CC {ECO:0000269|PubMed:27432874, ECO:0000269|PubMed:9225462}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=H(+) + L-tryptophan = CO2 + tryptamine; Xref=Rhea:RHEA:30339,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:16526, ChEBI:CHEBI:57887,
CC ChEBI:CHEBI:57912; EC=4.1.1.105;
CC Evidence={ECO:0000269|PubMed:27432874, ECO:0000269|PubMed:9225462};
CC -!- COFACTOR:
CC Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
CC Evidence={ECO:0000250|UniProtKB:P80041};
CC -!- TISSUE SPECIFICITY: Highly expressed in apex. Expressed in young stem
CC and bark tissues. Expressed at low levels in leaves, fruits and seeds.
CC {ECO:0000269|PubMed:9225462}.
CC -!- SIMILARITY: Belongs to the group II decarboxylase family.
CC {ECO:0000305}.
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DR EMBL; U73656; AAB39708.1; -; mRNA.
DR EMBL; KU842377; AON76721.1; -; mRNA.
DR AlphaFoldDB; P93082; -.
DR SMR; P93082; -.
DR KEGG; ag:AAB39708; -.
DR BioCyc; MetaCyc:MON-15093; -.
DR BRENDA; 4.1.1.105; 7029.
DR BRENDA; 4.1.1.28; 7029.
DR GO; GO:0036469; F:L-tryptophan decarboxylase activity; IDA:UniProtKB.
DR GO; GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.
DR GO; GO:0006520; P:cellular amino acid metabolic process; IEA:InterPro.
DR GO; GO:0035835; P:indole alkaloid biosynthetic process; IDA:UniProtKB.
DR Gene3D; 3.40.640.10; -; 1.
DR Gene3D; 3.90.1150.10; -; 1.
DR InterPro; IPR010977; Aromatic_deC.
DR InterPro; IPR002129; PyrdxlP-dep_de-COase.
DR InterPro; IPR015424; PyrdxlP-dep_Trfase.
DR InterPro; IPR015421; PyrdxlP-dep_Trfase_major.
DR InterPro; IPR015422; PyrdxlP-dep_Trfase_small.
DR InterPro; IPR021115; Pyridoxal-P_BS.
DR Pfam; PF00282; Pyridoxal_deC; 1.
DR PRINTS; PR00800; YHDCRBOXLASE.
DR SUPFAM; SSF53383; SSF53383; 1.
DR PROSITE; PS00392; DDC_GAD_HDC_YDC; 1.
PE 1: Evidence at protein level;
KW Decarboxylase; Lyase; Pyridoxal phosphate.
FT CHAIN 1..502
FT /note="Tryptophan decarboxylase TDC1"
FT /id="PRO_0000444191"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..17
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 319
FT /note="N6-(pyridoxal phosphate)lysine"
FT /evidence="ECO:0000250|UniProtKB:P80041"
FT CONFLICT 59
FT /note="R -> L (in Ref. 2; AON76721)"
FT /evidence="ECO:0000305"
FT CONFLICT 64
FT /note="G -> P (in Ref. 2; AON76721)"
FT /evidence="ECO:0000305"
FT CONFLICT 100
FT /note="H -> Y (in Ref. 2; AON76721)"
FT /evidence="ECO:0000305"
FT CONFLICT 179..183
FT /note="SPMHF -> RDRAL (in Ref. 2; AON76721)"
FT /evidence="ECO:0000305"
FT CONFLICT 190..194
FT /note="TSTSF -> NFNKL (in Ref. 2; AON76721)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 502 AA; 55495 MW; A4108BA27654F0FB CRC64;
MGSLDSNYDT ESPASVGQFN PLDPEEFRKQ AHCIVDFIAD YYKNIESYPV LSQVDPGYRH
SRLGKNAPYR SEPFESILKD VQKDIIPGMT HWMSPNFFAH FPATVSSAAF VGEMLCTCFN
SVGFNWLASP AATELEMVVI DWLANMLKLP KSFMFSGTGG GVLQGTTSEA ILCTLIAASP
MHFEIVGVKT STSFVVYGSD QTHSTYAKAC KLAGILPCNI RSIPTTADSN FSVSPLLLRR
AIEADKAAGM VPLYICATVG TTSTTAIDPL SSLADVANDY GVWFHVDAAY AGSACICPEF
RHYLDGIERA DSLSLSPHKW LLSYLDCCCL WVKSPSLLVK ALSTDPEYLK NQPSESKSVV
DYKDWQVGTG RRFKALRLWF VMRSYGVANL QSHIRTDVQM AKMFEGFVKS DPRFEILVPR
VFSLVCFRLN PISGSDPTGT EALNRKLLDW VNSTGRVYMT HTKVGGIYML RFAVGATLTE
KRHVSSAWKL IKEGADVLLK ED