TDIF1_PONAB
ID TDIF1_PONAB Reviewed; 329 AA.
AC Q5R595;
DT 18-MAR-2008, integrated into UniProtKB/Swiss-Prot.
DT 21-DEC-2004, sequence version 1.
DT 25-MAY-2022, entry version 54.
DE RecName: Full=Deoxynucleotidyltransferase terminal-interacting protein 1;
DE AltName: Full=Terminal deoxynucleotidyltransferase-interacting factor 1;
DE Short=TdIF1;
DE Short=TdT-interacting factor 1;
GN Name=DNTTIP1; Synonyms=TDIF1;
OS Pongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Pongo.
OX NCBI_TaxID=9601;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Kidney;
RG The German cDNA consortium;
RL Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Increases DNTT terminal deoxynucleotidyltransferase activity
CC (in vitro). Also acts as a transcriptional regulator, binding to the
CC consensus sequence 5'-GNTGCATG-3' following an AT-tract. Associates
CC with RAB20 promoter and positively regulates its transcription. Binds
CC DNA and nucleosomes; may recruit HDAC1 complexes to nucleosomes or
CC naked DNA. {ECO:0000250|UniProtKB:Q9H147}.
CC -!- SUBUNIT: Monomer and homodimer. A minor proportion may form
CC homotrimers. Interacts with ZNF541. Interacts with the terminal
CC deoxynucleotidyltransferase DNTT. Interacts with TRERF1. Identified in
CC a histone deacetylase complex that contains DNTTIP1, HDAC1 and MIDEAS;
CC this complex assembles into a tetramer that contains four copies of
CC each protein chain. Component of a histone deacetylase complex
CC containing DNTTIP1, ZNF541, HDAC1 and HDAC2.
CC {ECO:0000250|UniProtKB:Q99LB0, ECO:0000250|UniProtKB:Q9H147}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:Q9H147}.
CC -!- DOMAIN: The N-terminal domain mediates dimerization.
CC {ECO:0000250|UniProtKB:Q9H147}.
CC -!- DOMAIN: The C-terminal domain mediates interaction with DNA and
CC nucleosomes. It contains a HTH motif that mediates recognition of the
CC consensus sequence. {ECO:0000250|UniProtKB:Q9H147}.
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DR EMBL; CR860969; CAH93071.1; -; mRNA.
DR RefSeq; NP_001126819.1; NM_001133347.1.
DR AlphaFoldDB; Q5R595; -.
DR BMRB; Q5R595; -.
DR SMR; Q5R595; -.
DR STRING; 9601.ENSPPYP00000012369; -.
DR GeneID; 100173824; -.
DR KEGG; pon:100173824; -.
DR CTD; 116092; -.
DR eggNOG; KOG4801; Eukaryota.
DR HOGENOM; CLU_073342_0_0_1; -.
DR InParanoid; Q5R595; -.
DR Proteomes; UP000001595; Unplaced.
DR GO; GO:0000118; C:histone deacetylase complex; ISS:UniProtKB.
DR GO; GO:0005634; C:nucleus; ISS:UniProtKB.
DR GO; GO:0003677; F:DNA binding; ISS:UniProtKB.
DR GO; GO:0031491; F:nucleosome binding; ISS:UniProtKB.
DR InterPro; IPR041384; DNTTIP1_dimer.
DR InterPro; IPR026064; TdIF1.
DR PANTHER; PTHR23399; PTHR23399; 1.
DR Pfam; PF18192; DNTTIP1_dimer; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Nucleus; Phosphoprotein; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..329
FT /note="Deoxynucleotidyltransferase terminal-interacting
FT protein 1"
FT /id="PRO_0000326137"
FT DNA_BIND 159..173
FT /note="A.T hook"
FT /evidence="ECO:0000305"
FT DNA_BIND 216..237
FT /note="H-T-H motif"
FT /evidence="ECO:0000305"
FT REGION 1..22
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 56..147
FT /note="Important for dimerization"
FT /evidence="ECO:0000250|UniProtKB:Q9H147"
FT REGION 147..178
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 197..316
FT /note="Important for DNA and nucleosome binding"
FT /evidence="ECO:0000250|UniProtKB:Q9H147"
FT MOTIF 164..170
FT /note="Nuclear localization signal"
FT /evidence="ECO:0000255"
FT COMPBIAS 147..162
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 161
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:Q9H147"
SQ SEQUENCE 329 AA; 36982 MW; FB7828342CCCD24B CRC64;
MGATGDAEQP RGPSGAERGG LELGDAGAAG QLVLTNPWNI MIKHRQVQRR GRRSQMTTSF
TDPAISMDLL RAVLQPSINE EIQTVFNKYM KFFQKAALNV RDNVGEEVDA EQLIQEACRS
CLEQAKLLFS DGEKVIPRLT HELPGIKRGR QAEEECAHRG SPLPKKRKGR PPGHILSSDR
AAAGMVWKPK SCEPIRREGP KWDPARLNES TTFVLGSRAN KALGMGGTRG RIYIKHPHLF
KYAADPQDKH WLAEPHHMRA TGGKMAYLLI EEDIRDLAAS DDYRGCLDLK LEELKSFVLP
SWMVEKMRKY METLRTENEH RAVEAPPQT