TDRD7_XENLA
ID TDRD7_XENLA Reviewed; 1079 AA.
AC Q6NU04;
DT 31-MAY-2011, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 62.
DE RecName: Full=Tudor domain-containing protein 7;
GN Name=tdrd7;
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8355;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (APR-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Component of specific cytoplasmic RNA granules involved in
CC post-transcriptional regulation of specific genes: probably acts by
CC binding to specific mRNAs and regulating their translation. Probably
CC required during spermatogenesis (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm. Note=Localizes to cytoplasmic RNA
CC granules. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the TDRD7 family. {ECO:0000305}.
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DR EMBL; BC068798; AAH68798.1; -; mRNA.
DR RefSeq; NP_001084569.2; NM_001091100.1.
DR AlphaFoldDB; Q6NU04; -.
DR SMR; Q6NU04; -.
DR DNASU; 414521; -.
DR GeneID; 414521; -.
DR KEGG; xla:414521; -.
DR CTD; 414521; -.
DR Xenbase; XB-GENE-944688; tdrd7.L.
DR OrthoDB; 1276848at2759; -.
DR Proteomes; UP000186698; Chromosome 1L.
DR Bgee; 414521; Expressed in testis and 19 other tissues.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0035770; C:ribonucleoprotein granule; ISS:UniProtKB.
DR GO; GO:0003729; F:mRNA binding; ISS:UniProtKB.
DR GO; GO:0070306; P:lens fiber cell differentiation; ISS:UniProtKB.
DR GO; GO:0002089; P:lens morphogenesis in camera-type eye; ISS:UniProtKB.
DR GO; GO:0010608; P:post-transcriptional regulation of gene expression; ISS:UniProtKB.
DR GO; GO:0007283; P:spermatogenesis; ISS:UniProtKB.
DR CDD; cd09974; LOTUS_3_TDRD7; 1.
DR CDD; cd04508; TUDOR; 3.
DR Gene3D; 2.40.50.90; -; 3.
DR Gene3D; 3.30.420.610; -; 3.
DR InterPro; IPR041966; LOTUS-like.
DR InterPro; IPR025605; OST-HTH/LOTUS_dom.
DR InterPro; IPR035437; SNase_OB-fold_sf.
DR InterPro; IPR037978; TDRD7_LOTUS_3.
DR InterPro; IPR002999; Tudor.
DR Pfam; PF12872; OST-HTH; 2.
DR Pfam; PF00567; TUDOR; 3.
DR SMART; SM00333; TUDOR; 3.
DR PROSITE; PS51644; HTH_OST; 3.
DR PROSITE; PS50304; TUDOR; 2.
PE 2: Evidence at transcript level;
KW Cytoplasm; Differentiation; Reference proteome; Repeat; RNA-binding;
KW Spermatogenesis.
FT CHAIN 1..1079
FT /note="Tudor domain-containing protein 7"
FT /id="PRO_0000409520"
FT DOMAIN 1..69
FT /note="HTH OST-type 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00975"
FT DOMAIN 218..288
FT /note="HTH OST-type 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00975"
FT DOMAIN 330..398
FT /note="HTH OST-type 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00975"
FT DOMAIN 494..551
FT /note="Tudor 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00211"
FT DOMAIN 684..741
FT /note="Tudor 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00211"
FT REGION 109..132
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1079 AA; 120959 MW; D6FB4595E4CBB276 CRC64;
MLRAVLQANK NGVPLHKLQA EYKSVTGEPI PFKDMGFPAL DAYLKSIPSV VRIEVSRVGE
VTCYAVACKE TARIAELVAH QRSSKKKGGH QVNCQMRLKS TAPVSHFGKP KITLRQPGFT
PPQEMMIRKP VPTPPWGKGN YFGPRTFEYS PQPIPQLFGV APMQRHLPNM NRPERKVTLP
PRFQREVKSP LLPTPITDSN ANHTQSYKRV VIGSGQSDLP VIQNNLKELL NKHSNGLWLS
KLPQLYKETY KQDLGGEVLK QVPSWTHICT VQKLVSSGHT EIVIYATTRK QQPSTKNIQN
RSNDQAKPNV PVVLSTPSSP PPLQISGSIP KDELKEKIST ILTKYSNGLW YHALPKVFED
MFKQKLPIEA FNLDSLTDIC TVDLISEEPF KAILYGKSAE RAVQNSNPSV NNNIPQKLHD
REPPLCSEEP DMTMAPPPLV IPSEASPSVL VVELNSTNDV VIRYIGRDYS AAQERMEDEL
KDFCSKSSTA QVRPLRVGQL VAAKAEEDAW LRAQISAIED KKIKVCYVDY GFSETVDITK
VCKLGKPFYT LPFQATKCRL AGLEAFCDDS VIIKALEAKA CGKILAVEIL HKSEKPLVVL
YDTSGDDDIN INAACLKELY DRSLSLQLKA NLSFSNVTVT NVCSDGTLFC QVPSKGLAKL
YETLQKVDGE FQFQQVTSHL YVSLPFCGKI CLYHYKGKWA RVEITNVHSS RALDVHFLDS
GTIASVKVSE LKEIPPPLLR DLISIPPQAL KCCLADLPLN IGMWTPDAVL WLRNTVLNCP
ECSIKVVKID EAMNMVHIYL FTSNNFPDLE RSINRRITNE ELLKQKQKDV FLNMSVSSLE
KGRGGGGAPA SQLFPSGPCI SPTSVAKKPD MQQSSPVPSF NMPPALPLPR PGEHMDVFVS
VACHPGHFVC QPWQELHKLE LVMDEMRLHY STTEEKPIAL EKNKLYAAKI ENNWYRVLVK
GILTNGLVSV YELDHGRHEL VSCRKVQPLI EKFMHLPFQA ITSQLAGINC EQWSEETSIV
FRNHVEKKPL VALVQTIHES THPWERRVVA YIVDTTLPDT DIWIHELMTE YLAQFSKPE