TDRD7_XENTR
ID TDRD7_XENTR Reviewed; 1077 AA.
AC Q5M7P8;
DT 31-MAY-2011, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-2005, sequence version 1.
DT 03-AUG-2022, entry version 78.
DE RecName: Full=Tudor domain-containing protein 7;
GN Name=tdrd7;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (DEC-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Component of specific cytoplasmic RNA granules involved in
CC post-transcriptional regulation of specific genes: probably acts by
CC binding to specific mRNAs and regulating their translation. Probably
CC required during spermatogenesis (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm. Note=Localizes to cytoplasmic RNA
CC granules. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the TDRD7 family. {ECO:0000305}.
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DR EMBL; BC088519; AAH88519.1; -; mRNA.
DR RefSeq; NP_001011355.2; NM_001011355.2.
DR AlphaFoldDB; Q5M7P8; -.
DR SMR; Q5M7P8; -.
DR STRING; 8364.ENSXETP00000005565; -.
DR GeneID; 496822; -.
DR KEGG; xtr:496822; -.
DR CTD; 23424; -.
DR Xenbase; XB-GENE-944683; tdrd7.
DR eggNOG; KOG2039; Eukaryota.
DR InParanoid; Q5M7P8; -.
DR OrthoDB; 1276848at2759; -.
DR Proteomes; UP000008143; Chromosome 1.
DR Proteomes; UP000790000; Unplaced.
DR GO; GO:0043186; C:P granule; IBA:GO_Central.
DR GO; GO:0035770; C:ribonucleoprotein granule; ISS:UniProtKB.
DR GO; GO:0003729; F:mRNA binding; ISS:UniProtKB.
DR GO; GO:0070306; P:lens fiber cell differentiation; ISS:UniProtKB.
DR GO; GO:0002089; P:lens morphogenesis in camera-type eye; ISS:UniProtKB.
DR GO; GO:0030719; P:P granule organization; IBA:GO_Central.
DR GO; GO:0034587; P:piRNA metabolic process; IBA:GO_Central.
DR GO; GO:0010608; P:post-transcriptional regulation of gene expression; ISS:UniProtKB.
DR GO; GO:0007283; P:spermatogenesis; ISS:UniProtKB.
DR CDD; cd09974; LOTUS_3_TDRD7; 1.
DR CDD; cd04508; TUDOR; 3.
DR Gene3D; 2.40.50.90; -; 3.
DR Gene3D; 3.30.420.610; -; 3.
DR InterPro; IPR041966; LOTUS-like.
DR InterPro; IPR025605; OST-HTH/LOTUS_dom.
DR InterPro; IPR035437; SNase_OB-fold_sf.
DR InterPro; IPR037978; TDRD7_LOTUS_3.
DR InterPro; IPR002999; Tudor.
DR Pfam; PF12872; OST-HTH; 2.
DR Pfam; PF00567; TUDOR; 3.
DR SMART; SM00333; TUDOR; 3.
DR PROSITE; PS51644; HTH_OST; 3.
DR PROSITE; PS50304; TUDOR; 2.
PE 2: Evidence at transcript level;
KW Cytoplasm; Differentiation; Reference proteome; Repeat; RNA-binding;
KW Spermatogenesis.
FT CHAIN 1..1077
FT /note="Tudor domain-containing protein 7"
FT /id="PRO_0000409521"
FT DOMAIN 1..67
FT /note="HTH OST-type 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00975"
FT DOMAIN 220..289
FT /note="HTH OST-type 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00975"
FT DOMAIN 330..398
FT /note="HTH OST-type 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00975"
FT DOMAIN 494..551
FT /note="Tudor 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00211"
FT DOMAIN 684..741
FT /note="Tudor 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00211"
FT REGION 300..331
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 841..883
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1077 AA; 120613 MW; C9E1D056023AC478 CRC64;
MLRAVLQANK NGVPLSKLQA EYKSFTGEPI PFKDMGFHAL DAYLKSIPSV VRIEVSRVGE
VICYAVVCKE TARIAALVAH QRSSKKKSGG QVNCQMRLKY TAPVSHFGKP KATLRQPGFT
PPQEKIIRKP VPTSAWGKGN TFGSRTFEYS PPPIPQLFGI APIQMHLPNI NRPERKVTLP
PRFQREVNSF LNPTPMTDSN ANHTQSLKSV VPGSGQPRCD LSVIQNNLKE LLNKHSNGLW
LSKLPQLYKE TYKQDLGGEM LKQVPSWTHI CMVQKLVTMG HTEMVLYSTA IKQPSFTKNV
QNHSNNQAKP NVPVDSTPSS PPLQSSGNIP KDELKQKISK VLTKYSNGLW YHALPKVFED
MFKQKLPTEV LNLDSLTDIC TVDLISEEPF KAILYAKSAE RANQNSNPSV NNNIPQKLQD
RESPLLPEEP EMNMTPPPLV IPSEASPSVL VVELSSTNDV VIRYIGRDYS AAQEHMEDEM
KDFCSKSSTA KIGFLRVGQL VAAKAEEDVW LRAQISAIEG KKVKVCYVDY GFSEIVDITK
VCKLGKQFYT LPFQATKCRL AGLEAFCDDS IIIKALELKA CGKILAVEIL EKSEKPLVVL
YDTSGDDDIN INAACLKELC DRSLSLQLKA NSSFSNVIVT NVCSDGTLFC QLPSKGLAKL
YETLQKVDSE FQSKQVTSHL YVSLPFCGKI CLYHYKGKWA RVEITSVHSS RALDVQFLDS
GTIASVKVSE LKEIPPPLLR DLISIPPQAL RCCLADLPLR IGMWTPDAVL WLRNTVLNCL
ECSIRVVKVD EATNMVHIYL FTSNNFPDLE RSINRQITNE ELWKHQKDVF LNLSASTLES
SRGGGAQASE LSPPGLCKDH TSAVKKPDMQ QSSSVPSFNM PPPLPLPRPG EHMDVFVSVA
CHPGHFVCQP WQELHKLEVV MEEMLLHYST TEEKPVALEK NKLYAAKVEN KWYRVLVKGI
LTNGLVSVYE LDYGRHELVS CRKVQPLIEK FMQLPFQAIT SQLAGVSCEH WSEEASIVFR
NHVEKKPLVA LVQTIHESTH PWDRRAVAYI VDTSLPDTDI WIHELMTEYH IQLSKPE