TED7_ARATH
ID TED7_ARATH Reviewed; 205 AA.
AC Q9FI79;
DT 11-DEC-2019, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 119.
DE RecName: Full=Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7 {ECO:0000303|PubMed:19383897};
GN Name=TED7 {ECO:0000303|PubMed:19383897};
GN OrderedLocusNames=At5g48920 {ECO:0000312|Araport:AT5G48920};
GN ORFNames=K19E20.3 {ECO:0000312|EMBL:BAB10315.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10470850; DOI=10.1093/dnares/6.3.183;
RA Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Kotani H.,
RA Miyajima N., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. IX. Sequence
RT features of the regions of 1,011,550 bp covered by seventeen P1 and TAC
RT clones.";
RL DNA Res. 6:183-195(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Cheuk R.F., Chen H., Kim C.J., Shinn P., Ecker J.R.;
RT "Arabidopsis cDNA clones.";
RL Submitted (NOV-2003) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP FUNCTION, DISRUPTION PHENOTYPE, TISSUE SPECIFICITY, AND DEVELOPMENTAL
RP STAGE.
RX PubMed=19383897; DOI=10.1105/tpc.108.059154;
RA Endo S., Pesquet E., Yamaguchi M., Tashiro G., Sato M., Toyooka K.,
RA Nishikubo N., Udagawa-Motose M., Kubo M., Fukuda H., Demura T.;
RT "Identifying new components participating in the secondary cell wall
RT formation of vessel elements in zinnia and Arabidopsis.";
RL Plant Cell 21:1155-1165(2009).
CC -!- FUNCTION: Essential protein (PubMed:19383897). Involved in the
CC secondary cell wall (SCW) formation of vessel elements (e.g. protoxylem
CC and metaxylem), thus promoting tracheary element (TE) differentiation
CC (PubMed:19383897). {ECO:0000269|PubMed:19383897}.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000250|UniProtKB:C1PGW1};
CC Single-pass membrane protein {ECO:0000255}. Secreted, cell wall
CC {ECO:0000250|UniProtKB:C1PGW1}.
CC -!- TISSUE SPECIFICITY: Expressed preferentially in differentiating vessel
CC elements in seedlings. {ECO:0000269|PubMed:19383897}.
CC -!- DEVELOPMENTAL STAGE: Restricted to differentiating vessel elements of
CC protoxylem and metaxylem. {ECO:0000269|PubMed:19383897}.
CC -!- DISRUPTION PHENOTYPE: Constitutive loss of function results in seedling
CC lethality (PubMed:19383897). In conditionnal loss of function, aberrant
CC secondary cell wall (SCW) formation of root vessel elements; this
CC phenotype is stronger in double mutant plants lacking both TED6 and
CC TED7 (PubMed:19383897). {ECO:0000269|PubMed:19383897}.
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DR EMBL; AB017061; BAB10315.1; -; Genomic_DNA.
DR EMBL; CP002688; AED95743.1; -; Genomic_DNA.
DR EMBL; BT010840; AAR24207.1; -; mRNA.
DR EMBL; BT011316; AAR92352.1; -; mRNA.
DR RefSeq; NP_199703.1; NM_124269.3.
DR AlphaFoldDB; Q9FI79; -.
DR STRING; 3702.AT5G48920.1; -.
DR PaxDb; Q9FI79; -.
DR PRIDE; Q9FI79; -.
DR ProteomicsDB; 193598; -.
DR EnsemblPlants; AT5G48920.1; AT5G48920.1; AT5G48920.
DR GeneID; 834950; -.
DR Gramene; AT5G48920.1; AT5G48920.1; AT5G48920.
DR KEGG; ath:AT5G48920; -.
DR Araport; AT5G48920; -.
DR TAIR; locus:2154399; AT5G48920.
DR eggNOG; ENOG502RSQP; Eukaryota.
DR HOGENOM; CLU_087452_0_0_1; -.
DR InParanoid; Q9FI79; -.
DR OMA; PWTWHKK; -.
DR OrthoDB; 1607643at2759; -.
DR PRO; PR:Q9FI79; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FI79; baseline and differential.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-KW.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0009505; C:plant-type cell wall; ISS:UniProtKB.
DR GO; GO:0005886; C:plasma membrane; ISS:UniProtKB.
DR GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR GO; GO:0009834; P:plant-type secondary cell wall biogenesis; IGI:TAIR.
DR GO; GO:2000652; P:regulation of secondary cell wall biogenesis; IMP:UniProtKB.
DR GO; GO:1905177; P:tracheary element differentiation; IMP:UniProtKB.
DR InterPro; IPR044950; TED6/7.
DR PANTHER; PTHR35697; PTHR35697; 1.
PE 2: Evidence at transcript level;
KW Cell membrane; Cell wall; Cell wall biogenesis/degradation;
KW Developmental protein; Membrane; Reference proteome; Secreted;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..205
FT /note="Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7"
FT /id="PRO_0000448738"
FT TOPO_DOM 1..96
FT /note="Extracellular"
FT /evidence="ECO:0000305"
FT TRANSMEM 97..117
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 118..205
FT /note="Cytoplasmic"
FT /evidence="ECO:0000305"
FT REGION 13..88
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 176..205
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 14..88
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 205 AA; 22750 MW; 004E581CBD10AB69 CRC64;
MAASVEYFPY YSPPSHQHPL PSPVPPPPSH ISPPPPPFSP PHHPPPPHFS PPHQPPPSPY
PHPHPPPPSP YPHPHQPPPP PHVLPPPPPT PAPGHHVIIV VVISLGSLFF LAFLAAALFC
YLKKRRKSST KAEIIEFDEH LKVQETIVQG PHGEQTRVVM LEEDIHLVED IHKTEKLSRP
SHLSSTGRHA IDISDPNHHF TEQKS
