BRC2B_ARATH
ID BRC2B_ARATH Reviewed; 1155 AA.
AC Q7Y1C4; Q84W87; Q9M013;
DT 03-SEP-2014, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2003, sequence version 1.
DT 03-AUG-2022, entry version 136.
DE RecName: Full=Protein BREAST CANCER SUSCEPTIBILITY 2 homolog B {ECO:0000303|PubMed:16415210};
DE Short=AtBRCA2B {ECO:0000303|PubMed:16415210};
GN Name=BRCA2B {ECO:0000303|PubMed:16415210};
GN Synonyms=BRCA2(V) {ECO:0000303|PubMed:15014444};
GN OrderedLocusNames=At5g01630 {ECO:0000312|Araport:AT5G01630};
GN ORFNames=F7A7.150 {ECO:0000312|EMBL:CAB82279.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, INTERACTION WITH RAD51 AND DMC1, AND
RP TISSUE SPECIFICITY.
RX PubMed=15014444; DOI=10.1038/sj.emboj.7600146;
RA Siaud N., Dray E., Gy I., Gerard E., Takvorian N., Doutriaux M.P.;
RT "Brca2 is involved in meiosis in Arabidopsis thaliana as suggested by its
RT interaction with Dmc1.";
RL EMBO J. 23:1392-1401(2004).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130714; DOI=10.1038/35048507;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D.,
RA Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A.,
RA McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M.,
RA Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W.,
RA Bevan M., Fransz P.F.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 632-1155.
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [5]
RP INTERACTION WITH RAD51; DMC1; DSS1(V) AND DSS1(I).
RX PubMed=16415210; DOI=10.1104/pp.105.075838;
RA Dray E., Siaud N., Dubois E., Doutriaux M.P.;
RT "Interaction between Arabidopsis Brca2 and its partners Rad51, Dmc1, and
RT Dss1.";
RL Plant Physiol. 140:1059-1069(2006).
RN [6]
RP FUNCTION, AND DISRUPTION PHENOTYPE.
RX PubMed=22039535; DOI=10.1371/journal.pone.0026696;
RA Dumont M., Massot S., Doutriaux M.P., Gratias A.;
RT "Characterization of Brca2-deficient plants excludes the role of NHEJ and
RT SSA in the meiotic chromosomal defect phenotype.";
RL PLoS ONE 6:E26696-E26696(2011).
RN [7]
RP FUNCTION, AND DISRUPTION PHENOTYPE.
RX PubMed=22077663; DOI=10.1111/j.1469-8137.2011.03947.x;
RA Seeliger K., Dukowic-Schulze S., Wurz-Wildersinn R., Pacher M., Puchta H.;
RT "BRCA2 is a mediator of RAD51- and DMC1-facilitated homologous
RT recombination in Arabidopsis thaliana.";
RL New Phytol. 193:364-375(2012).
CC -!- FUNCTION: Involved in double-strand break repair and/or homologous
CC recombination by mediating RAD51- and DMC1-facilitated DNA repair.
CC Plays an essential role in both somatic and meiotic homologous
CC recombination. Is crucial for the formation of RAD51 and DMC1 foci
CC during male meiotic homologous recombination in prophase I.
CC {ECO:0000269|PubMed:15014444, ECO:0000269|PubMed:22039535,
CC ECO:0000269|PubMed:22077663}.
CC -!- SUBUNIT: Interacts with RAD51 and DMC1 (PubMed:15014444,
CC PubMed:16415210). Interacts with DSS1(I) and DSS1(V) (PubMed:16415210).
CC Can interact with both RAD51 and DSS1(I) or both DMC1 and DSS1(I) in a
CC tripartite complex (PubMed:16415210). {ECO:0000269|PubMed:15014444,
CC ECO:0000269|PubMed:16415210}.
CC -!- INTERACTION:
CC Q7Y1C4; Q39009: DMC1; NbExp=6; IntAct=EBI-307707, EBI-307715;
CC Q7Y1C4; Q9XIR8: DSS1(I); NbExp=2; IntAct=EBI-307707, EBI-931045;
CC Q7Y1C4; Q9FL96: DSS1(V); NbExp=2; IntAct=EBI-307707, EBI-931034;
CC Q7Y1C4; P94102: RAD51; NbExp=5; IntAct=EBI-307707, EBI-307687;
CC -!- TISSUE SPECIFICITY: Expressed in flower buds.
CC {ECO:0000269|PubMed:15014444}.
CC -!- DISRUPTION PHENOTYPE: No visible phenotype under normal growth
CC conditions, but the double mutants brca2a and brca2b are sterile due to
CC aberrant chromosome aggregates, chromosomal fragmentation and
CC missegregation during meiosis. {ECO:0000269|PubMed:22039535,
CC ECO:0000269|PubMed:22077663}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAB82279.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AJ488305; CAD32572.1; -; mRNA.
DR EMBL; AL161946; CAB82279.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED90369.1; -; Genomic_DNA.
DR EMBL; BT004117; AAO42140.1; -; mRNA.
DR PIR; T48184; T48184.
DR RefSeq; NP_195783.3; NM_120241.4.
DR AlphaFoldDB; Q7Y1C4; -.
DR SMR; Q7Y1C4; -.
DR BioGRID; 16986; 4.
DR IntAct; Q7Y1C4; 5.
DR STRING; 3702.AT5G01630.1; -.
DR iPTMnet; Q7Y1C4; -.
DR PaxDb; Q7Y1C4; -.
DR PRIDE; Q7Y1C4; -.
DR ProteomicsDB; 222820; -.
DR EnsemblPlants; AT5G01630.1; AT5G01630.1; AT5G01630.
DR GeneID; 831710; -.
DR Gramene; AT5G01630.1; AT5G01630.1; AT5G01630.
DR KEGG; ath:AT5G01630; -.
DR Araport; AT5G01630; -.
DR TAIR; locus:2149800; AT5G01630.
DR eggNOG; KOG4751; Eukaryota.
DR HOGENOM; CLU_004336_0_0_1; -.
DR InParanoid; Q7Y1C4; -.
DR OMA; CYPTRAA; -.
DR OrthoDB; 91604at2759; -.
DR PhylomeDB; Q7Y1C4; -.
DR PRO; PR:Q7Y1C4; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q7Y1C4; baseline and differential.
DR Genevisible; Q7Y1C4; AT.
DR GO; GO:0005739; C:mitochondrion; HDA:TAIR.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0000724; P:double-strand break repair via homologous recombination; IGI:UniProtKB.
DR GO; GO:0051321; P:meiotic cell cycle; IMP:TAIR.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IBA:GO_Central.
DR CDD; cd04493; BRCA2DBD_OB1; 1.
DR Gene3D; 2.40.50.140; -; 4.
DR InterPro; IPR015525; BRCA2.
DR InterPro; IPR015252; BRCA2_hlx.
DR InterPro; IPR036315; BRCA2_hlx_sf.
DR InterPro; IPR015187; BRCA2_OB_1.
DR InterPro; IPR002093; BRCA2_repeat.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR PANTHER; PTHR11289; PTHR11289; 2.
DR Pfam; PF09169; BRCA-2_helical; 1.
DR Pfam; PF09103; BRCA-2_OB1; 1.
DR Pfam; PF00634; BRCA2; 3.
DR PIRSF; PIRSF002397; BRCA2; 1.
DR SUPFAM; SSF50249; SSF50249; 3.
DR SUPFAM; SSF81872; SSF81872; 1.
DR PROSITE; PS50138; BRCA2_REPEAT; 2.
PE 1: Evidence at protein level;
KW Cell cycle; DNA damage; DNA recombination; DNA repair; DNA-binding;
KW Meiosis; Reference proteome; Repeat.
FT CHAIN 1..1155
FT /note="Protein BREAST CANCER SUSCEPTIBILITY 2 homolog B"
FT /id="PRO_0000430160"
FT REPEAT 63..97
FT /note="BRCA2 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00032"
FT REPEAT 116..150
FT /note="BRCA2 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00032"
FT REPEAT 163..197
FT /note="BRCA2 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00032"
FT REPEAT 257..291
FT /note="BRCA2 4"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00032"
SQ SEQUENCE 1155 AA; 127255 MW; 3D310C37E044C2AE CRC64;
MSTWHLFSDS SGDGFRWEVA GRILQSVSDS TPTKALESTA PLPSMADLLL QGCSKLIERE
ESMPGEIPMF RTGLGKSVVL KESSIAKAKS ILAENVAYSD LQNTNCSIPQ TRQVDTAETM
PMFRTALGKT VPLKESSIAK PLSILGSDMI IDSDNVLPRE SGFGVPNSLF QTASNKKVNV
SSAGLARAKA LLGLEEDDLN GFNHVNQSSS SLQQHGWSGL KTHEEFDATV VKHHSGTPGQ
YENYVSGKRS EILNPSLKVP PTKFQTAGGK SLSVSAEALK RARNLLGDPE LGSFFDDVAG
GDQFFTPQKD ERLSDIAINN GSVNTGYIAH EEKTSNKHTS NSFVSPLHSS SKQFRSVNLE
NLASGGNLIK KFDTAVDETN CALNISKPAT HGLSNNRPLA SDMAVNNSKG NGFIPRARQL
GRPADQPLVD ITNRRDTAYA NNKQDSTQKK RLGKTVSVSP FKRPRISSFK TPLKKNAQQA
SSGLSVVSCD TLTSKKVLST RYPEKSPRVY IKEFFGMHPT ATTRMDYVPD HVRRIKSSNA
DKYVFCDESS SNKVGAETFL QMLAESGASL QHASRKWVTN HYRWIVWKLA CYDIYYPAKC
RGNFLTITNV LEELKYRYER EVNHGHCSAI KRILSGDAPA SSMMVLCISA INPRTDNGSQ
EAHCSDNCSN VKVELTDGWY SMNAALDVVL TKQLNAGKLF VGQKLRILGA GLSGWATPTS
PLEAVISSTI CLLLNINGTY RAHWADRLGF CKEIGVPLAF NCIKCNGGPV PKTLAGITRI
YPILYKERLG EKKSIVRSER IESRIIQLHN QRRSALVEGI MCEYQRGING VHSQNDTDSE
EGAKVFKLLE TAAEPELLMA EMSLEQLTSF TTYKAKFEAA KQMQMEKSVA KALEDAGLGE
RNVTPFMRIR LVGLTSLSNE GEHNPKEGIV TIWDPTERQR TELTEGKIYI MKGLVPMNSD
SETLYLHARG SSSRWQPLSP KDSENFQPFF NPRKPISLSN LGEIPLSSEF DIAAYVVYVG
DAYTDVLQKK QWVFVTDGST QHSGEISNSL LAISFSTPFM DDSSVSHISH NLVGSVVGFC
NLIKRAKDAT NEMWVAETTE NSVYFINAEA AYSSHLKTRS AHIQTWAKLY SSKSVIHELR
QRVLFIIGAC KSPSC