TERS_BPP21
ID TERS_BPP21 Reviewed; 182 AA.
AC P68654; P36694;
DT 07-DEC-2004, integrated into UniProtKB/Swiss-Prot.
DT 07-DEC-2004, sequence version 1.
DT 03-AUG-2022, entry version 51.
DE RecName: Full=Terminase, small subunit;
DE AltName: Full=Gp1;
GN Name=1; Synonyms=nohA;
OS Enterobacteria phage P21 (Bacteriophage 21) (Bacteriophage P21).
OC Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes;
OC Caudovirales; Siphoviridae; Lambdavirus.
OX NCBI_TaxID=10711;
OH NCBI_TaxID=562; Escherichia coli.
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=3159906; DOI=10.1016/0022-2836(85)90217-7;
RA Miller G., Feiss M.;
RT "Sequence of the left end of phage 21 DNA.";
RL J. Mol. Biol. 183:246-249(1985).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=8468297; DOI=10.1128/jb.175.8.2393-2399.1993;
RA Smith M.P., Feiss M.;
RT "Sites and gene products involved in lambdoid phage DNA packaging.";
RL J. Bacteriol. 175:2393-2399(1993).
CC -!- FUNCTION: Component of the terminase that processes and encapsidates
CC viral genomes during virion assembly. The terminase is composed of two
CC small and one large subunits. To initiate packaging, it binds a
CC specific sequence, at the junction of adjacent viral genomes in the
CC concatemeric DNA substrate. Next, in a reaction stimulated by the
CC presence of proheads and ATP but not requiring ATP hydrolysis, the
CC terminase creates two nicks at a specific site, one on each stand.
CC Terminase then separates the cohesive ends in a reaction requiring ATP
CC hydrolysis. The heterotrimer remains bound to the left end of the
CC genome to be packaged, forming a stable DNA-protein complex known as
CC complex I. In a reaction facilitated by a viral assembly catalyst,
CC gpFI, complex I binds a prohead, a preformed head shell precursor, to
CC form complex II. In another packaging reaction requiring ATP
CC hydrolysis, the DNA is translocated into the prohead until the next
CC specific site on the concatemer reaches the packaging complex. At this
CC time the downstream specific site is cut and the heterotrimer undocks
CC from the DNA-filled head to remain bound to the left end of
CC concatemer's next genome. The new heterotrimer-DNA complex I binds
CC another prohead to continue the processive, polarized packaging of
CC viral genomes. The terminase is dependent upon host integration host
CC factor (ihfA/ihfB) for these activities.
CC {ECO:0000250|UniProtKB:P03707}.
CC -!- SUBUNIT: Heterotrimer of two small and one large terminase subunits.
CC The active complex may be composed of five heterotrimers.
CC {ECO:0000250|UniProtKB:P03707}.
CC -!- SUBCELLULAR LOCATION: Host cytoplasm {ECO:0000250|UniProtKB:P03707}.
CC -!- SIMILARITY: Belongs to the terminase small subunit family.
CC {ECO:0000305}.
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DR EMBL; M23775; AAA32337.1; -; Genomic_DNA.
DR EMBL; M81255; AAA32339.1; -; Genomic_DNA.
DR EMBL; X02501; CAA26342.1; -; Genomic_DNA.
DR PDB; 7LWR; X-ray; 2.35 A; A/B/C/D/E/F/G/H=1-54.
DR PDBsum; 7LWR; -.
DR SMR; P68654; -.
DR GO; GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR Gene3D; 1.10.10.10; -; 1.
DR InterPro; IPR009061; DNA-bd_dom_put_sf.
DR InterPro; IPR010906; Phage_lambda_Nu1_terminase-ssu.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR Pfam; PF07471; Phage_Nu1; 1.
DR SUPFAM; SSF46955; SSF46955; 1.
PE 1: Evidence at protein level;
KW 3D-structure; ATP-binding; Coiled coil; DNA-binding; Host cytoplasm;
KW Nucleotide-binding; Viral genome packaging; Viral release from host cell.
FT CHAIN 1..182
FT /note="Terminase, small subunit"
FT /id="PRO_0000077676"
FT COILED 51..105
FT /evidence="ECO:0000255"
FT BINDING 31..36
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000250"
SQ SEQUENCE 182 AA; 20507 MW; E3EBD9DCA6820284 CRC64;
MKVNKKRLAE IFNVDPRTIE RWQSQGLPCA SKGSKGIESV FDTAMAIQWY AQRETDIENE
KLRKELDDLR AAAESDLQPG TIDYERYRLT KAQADAQELK NAREDGVVLE TELFTFILQR
VAQEISGILV RVPLTLQRKY PDISPSHLDV VKTEIAKASN VAAKAGENVG GWIDDFRRAE
GS