TET4_ARATH
ID TET4_ARATH Reviewed; 327 AA.
AC Q9LSS4;
DT 06-FEB-2013, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 102.
DE RecName: Full=Tetraspanin-4;
GN Name=TET4; OrderedLocusNames=At5g60220; ORFNames=F15L12.11;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RA Kaneko T., Katoh T., Asamizu E., Sato S., Nakamura Y., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. XI.";
RL Submitted (APR-1999) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- FUNCTION: May be involved in the regulation of cell differentiation.
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000250}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the tetraspanin (TM4SF) family. {ECO:0000305}.
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DR EMBL; AB026632; BAA97503.1; -; Genomic_DNA.
DR EMBL; CP002688; AED97295.1; -; Genomic_DNA.
DR RefSeq; NP_200830.1; NM_125415.2.
DR AlphaFoldDB; Q9LSS4; -.
DR PaxDb; Q9LSS4; -.
DR PRIDE; Q9LSS4; -.
DR ProteomicsDB; 232744; -.
DR EnsemblPlants; AT5G60220.1; AT5G60220.1; AT5G60220.
DR GeneID; 836144; -.
DR Gramene; AT5G60220.1; AT5G60220.1; AT5G60220.
DR KEGG; ath:AT5G60220; -.
DR Araport; AT5G60220; -.
DR TAIR; locus:2144050; AT5G60220.
DR eggNOG; ENOG502QU76; Eukaryota.
DR HOGENOM; CLU_066970_0_0_1; -.
DR InParanoid; Q9LSS4; -.
DR OMA; ITIMVIS; -.
DR OrthoDB; 1023323at2759; -.
DR PhylomeDB; Q9LSS4; -.
DR PRO; PR:Q9LSS4; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9LSS4; baseline and differential.
DR Genevisible; Q9LSS4; AT.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0009506; C:plasmodesma; IBA:GO_Central.
DR GO; GO:0009734; P:auxin-activated signaling pathway; IEA:InterPro.
DR InterPro; IPR044991; TET_plant.
DR InterPro; IPR018499; Tetraspanin/Peripherin.
DR PANTHER; PTHR32191; PTHR32191; 1.
DR Pfam; PF00335; Tetraspanin; 1.
PE 3: Inferred from homology;
KW Glycoprotein; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..327
FT /note="Tetraspanin-4"
FT /id="PRO_0000421044"
FT TOPO_DOM 1..6
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 7..27
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 28..43
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 44..64
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 65..75
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 76..96
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 97..235
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 236..256
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 257..287
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 288..308
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 309..327
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT CARBOHYD 34
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 187
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 327 AA; 37178 MW; 505A06D6A2D39F8D CRC64;
MRSRSNLIGL INFFTFLLSI PILGGGIWLS SRANSTDCLR FLQWPLIIIG ISIMVISLAG
IAGACYQNKF LMWLYLFTMF FVIAALIGFT IFAYVVTDKG SGRFVMNRRY LDYYLNDYSG
WLKDRVTDNG YWRDIGSCVR DSGVCKKIGR DLNGVPETAH MFYFRNLSPV ESGCCKPPTD
CGYTYVNETV WIPGGEMVGP NPDCMLWNND QRLLCYQCSS CKAGVLGSLK KSWRKVSVIN
IVVVIILVIF YVIACAAYQN VKRMYNDEPV GEARMTNLIL VIFKFKEILV QFFFGIVFLL
LFNGLMVCCC NDKFAFSVFF FGYVTYA