TEX38_MOUSE
ID TEX38_MOUSE Reviewed; 201 AA.
AC A2A8T7; Q9D4X3;
DT 26-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 20-FEB-2007, sequence version 1.
DT 03-AUG-2022, entry version 87.
DE RecName: Full=Testis-expressed protein 38;
DE AltName: Full=ATPAF1 antisense RNA 1;
DE AltName: Full=ATPAF1 antisense gene protein 1;
GN Name=Tex38;
OS Mus musculus (Mouse).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Mus; Mus.
OX NCBI_TaxID=10090;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=C57BL/6J; TISSUE=Testis;
RX PubMed=16141072; DOI=10.1126/science.1112014;
RA Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N.,
RA Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K.,
RA Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.,
RA Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R.,
RA Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T.,
RA Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A.,
RA Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B.,
RA Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M.,
RA Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S.,
RA Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E.,
RA Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D.,
RA Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M.,
RA Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H.,
RA Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V.,
RA Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S.,
RA Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H.,
RA Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N.,
RA Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F.,
RA Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G.,
RA Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z.,
RA Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C.,
RA Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y.,
RA Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S.,
RA Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K.,
RA Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R.,
RA van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H.,
RA Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M.,
RA Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C.,
RA Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S.,
RA Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K.,
RA Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M.,
RA Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C.,
RA Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A.,
RA Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.;
RT "The transcriptional landscape of the mammalian genome.";
RL Science 309:1559-1563(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C57BL/6J;
RX PubMed=19468303; DOI=10.1371/journal.pbio.1000112;
RA Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X.,
RA Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y.,
RA Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S.,
RA Teague B., Potamousis K., Churas C., Place M., Herschleb J., Runnheim R.,
RA Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., Lindblad-Toh K.,
RA Eichler E.E., Ponting C.P.;
RT "Lineage-specific biology revealed by a finished genome assembly of the
RT mouse.";
RL PLoS Biol. 7:E1000112-E1000112(2009).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass membrane
CC protein {ECO:0000305}.
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DR EMBL; AK016041; BAB30090.1; -; mRNA.
DR EMBL; AL626806; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR CCDS; CCDS51274.1; -.
DR RefSeq; NP_083472.1; NM_029196.1.
DR AlphaFoldDB; A2A8T7; -.
DR SMR; A2A8T7; -.
DR STRING; 10090.ENSMUSP00000102131; -.
DR iPTMnet; A2A8T7; -.
DR PhosphoSitePlus; A2A8T7; -.
DR PaxDb; A2A8T7; -.
DR PRIDE; A2A8T7; -.
DR ProteomicsDB; 263109; -.
DR Antibodypedia; 66742; 22 antibodies from 9 providers.
DR Ensembl; ENSMUST00000106521; ENSMUSP00000102131; ENSMUSG00000044556.
DR GeneID; 75173; -.
DR KEGG; mmu:75173; -.
DR UCSC; uc008ufi.2; mouse.
DR CTD; 374973; -.
DR MGI; MGI:1922423; Tex38.
DR VEuPathDB; HostDB:ENSMUSG00000044556; -.
DR eggNOG; ENOG502SFNG; Eukaryota.
DR GeneTree; ENSGT00390000016446; -.
DR HOGENOM; CLU_092826_0_0_1; -.
DR InParanoid; A2A8T7; -.
DR OMA; WINKRRH; -.
DR OrthoDB; 1417535at2759; -.
DR TreeFam; TF337717; -.
DR BioGRID-ORCS; 75173; 1 hit in 70 CRISPR screens.
DR PRO; PR:A2A8T7; -.
DR Proteomes; UP000000589; Chromosome 4.
DR RNAct; A2A8T7; protein.
DR Bgee; ENSMUSG00000044556; Expressed in spermatid and 43 other tissues.
DR ExpressionAtlas; A2A8T7; baseline and differential.
DR Genevisible; A2A8T7; MM.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR InterPro; IPR031677; TEX38.
DR PANTHER; PTHR37362; PTHR37362; 1.
DR Pfam; PF15834; THEG4; 1.
PE 2: Evidence at transcript level;
KW Membrane; Reference proteome; Transmembrane; Transmembrane helix.
FT CHAIN 1..201
FT /note="Testis-expressed protein 38"
FT /id="PRO_0000322539"
FT TRANSMEM 3..23
FT /note="Helical"
FT /evidence="ECO:0000255"
FT CONFLICT 41
FT /note="E -> V (in Ref. 1; BAB30090)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 201 AA; 22716 MW; BFC5ACFE53EF599F CRC64;
MWISLCIGFL GLCSVLIGSC ILFLHWKKNL QREERAQQWV EVMRAATFTY SPLLYWINKR
RYHGMNVAIN TGPPPAVTKT EPEDQNSDSL WELDLSEGRN FVVQDSSPRG EASDLLQHVL
GIPKQPQSSK MSQPRTDSPF PLPIFQEVPF ALSLCHLPPM LNHSVSYPLA NRPERNVPFC
SLPTLAHGTN CFNAKPFALE L
