TF2B2_HALSA
ID TF2B2_HALSA Reviewed; 325 AA.
AC Q9HRE6;
DT 01-JUN-2001, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 119.
DE RecName: Full=Transcription initiation factor IIB 2 {ECO:0000255|HAMAP-Rule:MF_00383};
DE Short=TFIIB 2 {ECO:0000255|HAMAP-Rule:MF_00383};
GN Name=tfbB {ECO:0000255|HAMAP-Rule:MF_00383}; OrderedLocusNames=VNG_0734G;
OS Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
OS (Halobacterium halobium).
OC Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales;
OC Halobacteriaceae; Halobacterium.
OX NCBI_TaxID=64091;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700922 / JCM 11081 / NRC-1;
RX PubMed=11016950; DOI=10.1073/pnas.190337797;
RA Ng W.V., Kennedy S.P., Mahairas G.G., Berquist B., Pan M., Shukla H.D.,
RA Lasky S.R., Baliga N.S., Thorsson V., Sbrogna J., Swartzell S., Weir D.,
RA Hall J., Dahl T.A., Welti R., Goo Y.A., Leithauser B., Keller K., Cruz R.,
RA Danson M.J., Hough D.W., Maddocks D.G., Jablonski P.E., Krebs M.P.,
RA Angevine C.M., Dale H., Isenbarger T.A., Peck R.F., Pohlschroder M.,
RA Spudich J.L., Jung K.-H., Alam M., Freitas T., Hou S., Daniels C.J.,
RA Dennis P.P., Omer A.D., Ebhardt H., Lowe T.M., Liang P., Riley M., Hood L.,
RA DasSarma S.;
RT "Genome sequence of Halobacterium species NRC-1.";
RL Proc. Natl. Acad. Sci. U.S.A. 97:12176-12181(2000).
CC -!- FUNCTION: Stabilizes TBP binding to an archaeal box-A promoter. Also
CC responsible for recruiting RNA polymerase II to the pre-initiation
CC complex (DNA-TBP-TFIIB). {ECO:0000255|HAMAP-Rule:MF_00383}.
CC -!- SIMILARITY: Belongs to the TFIIB family. {ECO:0000255|HAMAP-
CC Rule:MF_00383}.
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DR EMBL; AE004437; AAG19212.1; -; Genomic_DNA.
DR PIR; H84230; H84230.
DR RefSeq; WP_010902508.1; NC_002607.1.
DR AlphaFoldDB; Q9HRE6; -.
DR SMR; Q9HRE6; -.
DR STRING; 64091.VNG_0734G; -.
DR PaxDb; Q9HRE6; -.
DR EnsemblBacteria; AAG19212; AAG19212; VNG_0734G.
DR GeneID; 5952668; -.
DR GeneID; 62886335; -.
DR KEGG; hal:VNG_0734G; -.
DR PATRIC; fig|64091.14.peg.561; -.
DR HOGENOM; CLU_043736_0_0_2; -.
DR InParanoid; Q9HRE6; -.
DR OMA; TKMMHDK; -.
DR OrthoDB; 35979at2157; -.
DR PhylomeDB; Q9HRE6; -.
DR Proteomes; UP000000554; Chromosome.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:UniProtKB-UniRule.
DR GO; GO:0017025; F:TBP-class protein binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-UniRule.
DR GO; GO:0070897; P:transcription preinitiation complex assembly; IEA:InterPro.
DR CDD; cd00043; CYCLIN; 2.
DR HAMAP; MF_00383; TF2B_arch; 1.
DR InterPro; IPR013763; Cyclin-like.
DR InterPro; IPR036915; Cyclin-like_sf.
DR InterPro; IPR000812; TFIIB.
DR InterPro; IPR023484; TFIIB_arc.
DR InterPro; IPR023486; TFIIB_CS.
DR InterPro; IPR013150; TFIIB_cyclin.
DR InterPro; IPR013137; Znf_TFIIB.
DR PANTHER; PTHR11618; PTHR11618; 1.
DR Pfam; PF08271; TF_Zn_Ribbon; 1.
DR Pfam; PF00382; TFIIB; 2.
DR PRINTS; PR00685; TIFACTORIIB.
DR SMART; SM00385; CYCLIN; 2.
DR SUPFAM; SSF47954; SSF47954; 2.
DR PROSITE; PS00782; TFIIB; 2.
DR PROSITE; PS51134; ZF_TFIIB; 1.
PE 3: Inferred from homology;
KW Metal-binding; Reference proteome; Repeat; Transcription;
KW Transcription regulation; Zinc; Zinc-finger.
FT CHAIN 1..325
FT /note="Transcription initiation factor IIB 2"
FT /id="PRO_0000119312"
FT REPEAT 144..227
FT /note="1"
FT REPEAT 238..319
FT /note="2"
FT ZN_FING 28..58
FT /note="TFIIB-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00469"
FT REGION 1..29
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 73..93
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..18
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 32
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00469"
FT BINDING 35
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00469"
FT BINDING 50
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00469"
FT BINDING 53
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00469"
SQ SEQUENCE 325 AA; 36156 MW; 32FD89E9FC792F2C CRC64;
MSDSTIRTYS SDQRQTDNDE TVSTPDEDVL TCPECGGQVI DDEEHGESVC VDCGLVVEEN
GIDRGPEWRA FNSTEKDEKS RVGAPTTNMM HDKGLSTNIG WQDKDAYGNS LSSNQRQKMQ
RLRKWNERFR TRNSKERNLK QALGEIERMA SALGLPKEVR ETASVIYRRA LSEDLLPGRS
IEGVATAALY ASARQLSTPR SIDEVANVSR IDEMEFKRTY RYIVRELSLE VAPADPAQYV
PRFASDLDLP DEVERRSREL ISNAQADGVT SGKSPVGLAA AAIYASSLLT NHKVTQSEVS
EVTDVSEVTI RNRYQELLEA TEAAA