TF3A_XENBO
ID TF3A_XENBO Reviewed; 339 AA.
AC P17842;
DT 01-AUG-1990, integrated into UniProtKB/Swiss-Prot.
DT 01-AUG-1990, sequence version 1.
DT 25-MAY-2022, entry version 107.
DE RecName: Full=Transcription factor IIIA;
DE Short=TFIIIA;
GN Name=gtf3a;
OS Xenopus borealis (Kenyan clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8354;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC TISSUE=Ovary;
RX PubMed=2110661; DOI=10.1093/nar/18.8.2117;
RA Gaskins C.J., Hanas J.S.;
RT "Sequence variation in transcription factor IIIA.";
RL Nucleic Acids Res. 18:2117-2123(1990).
RN [2]
RP NUCLEOTIDE SEQUENCE [MRNA], AND FUNCTION.
RX PubMed=2331751; DOI=10.1016/0092-8674(90)90809-s;
RA Joho K.E., Darby M.K., Crawford E.T., Brown D.D.;
RT "A finger protein structurally similar to TFIIIA that binds exclusively to
RT 5S RNA in Xenopus.";
RL Cell 61:293-300(1990).
CC -!- FUNCTION: Involved in ribosomal large subunit biogenesis (By
CC similarity). Interacts with the internal control region (ICR) of
CC approximately 50 bases within the 5S RNA genes, is required for correct
CC transcription of these genes by RNA polymerase III (By similarity).
CC Also binds the transcribed 5S RNA's (PubMed:2331751).
CC {ECO:0000250|UniProtKB:P03001, ECO:0000250|UniProtKB:Q92664,
CC ECO:0000269|PubMed:2331751}.
CC -!- SUBCELLULAR LOCATION: Nucleus.
CC -!- TISSUE SPECIFICITY: Synthesized in oocytes and, in much lower levels,
CC in somatic cells.
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DR EMBL; X17695; CAA35689.1; -; mRNA.
DR EMBL; M32472; AAA49713.1; -; mRNA.
DR PIR; B34895; B34895.
DR AlphaFoldDB; P17842; -.
DR SMR; P17842; -.
DR PRIDE; P17842; -.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0042273; P:ribosomal large subunit biogenesis; ISS:UniProtKB.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR Pfam; PF00096; zf-C2H2; 6.
DR SMART; SM00355; ZnF_C2H2; 9.
DR SUPFAM; SSF57667; SSF57667; 6.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 8.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 8.
PE 2: Evidence at transcript level;
KW DNA-binding; Metal-binding; Nucleus; Repeat; Ribosome biogenesis;
KW RNA-binding; Transcription; Transcription regulation; Zinc; Zinc-finger.
FT CHAIN 1..339
FT /note="Transcription factor IIIA"
FT /id="PRO_0000047084"
FT ZN_FING 13..37
FT /note="C2H2-type 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 43..67
FT /note="C2H2-type 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 73..98
FT /note="C2H2-type 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 105..129
FT /note="C2H2-type 4"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 135..159
FT /note="C2H2-type 5"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 162..188
FT /note="C2H2-type 6"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 192..214
FT /note="C2H2-type 7"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 221..246
FT /note="C2H2-type 8"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 252..276
FT /note="C2H2-type 9"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT REGION 275..339
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 275..292
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 222
FT /note="C -> R (in Ref. 2; AAA49713)"
FT /evidence="ECO:0000305"
FT CONFLICT 235
FT /note="E -> A (in Ref. 2; AAA49713)"
FT /evidence="ECO:0000305"
FT CONFLICT 292
FT /note="R -> K (in Ref. 2; AAA49713)"
FT /evidence="ECO:0000305"
FT CONFLICT 310
FT /note="S -> N (in Ref. 2; AAA49713)"
FT /evidence="ECO:0000305"
FT CONFLICT 314
FT /note="A -> G (in Ref. 2; AAA49713)"
FT /evidence="ECO:0000305"
FT CONFLICT 319
FT /note="G -> D (in Ref. 2; AAA49713)"
FT /evidence="ECO:0000305"
FT CONFLICT 336
FT /note="V -> A (in Ref. 2; AAA49713)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 339 AA; 39202 MW; A4D006C537961599 CRC64;
MGEKALPVVY KRYICSFADC GASYNKNWKL RAHLCKHTGE KPFPCKEEGC DKGFTSLHHL
TRHSITHTGE KNFKCDSDKC DLTFTTKANM KKHFNRFHNL QLCVYVCHFE GCDKAFKKHN
QLKVHQFTHT QQLPYKCPHE GCDKSFSVPS CLKRHEKVHA GYPCKKDDSC LFVGKTWTLY
LKHVKECHQE PVMCDECKRT FKHKDYLRNH KKTHKKERTV YCCPRDGCER SYTTEFNLQS
HMQSFHEEQR PFACEHAECG KSFAMKKSLE RHSVVHDPEK RKLKEKCPRP KRSLASRLSG
CAPPKSKEKS AAKATEKTGS VVKNKPSGTE TKGSLVIEK