TFP11_XENTR
ID TFP11_XENTR Reviewed; 825 AA.
AC Q0IIX9; A1XD99;
DT 01-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-JUL-2008, sequence version 2.
DT 03-AUG-2022, entry version 65.
DE RecName: Full=Tuftelin-interacting protein 11;
DE AltName: Full=Septin and tuftelin-interacting protein 1;
DE Short=STIP-1;
GN Name=tfip11; Synonyms=stip;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=17289020; DOI=10.1016/j.yexcr.2007.01.003;
RA Ji Q., Huang C.-H., Peng J., Hashmi S., Ye T., Chen Y.;
RT "Characterization of STIP, a multi-domain nuclear protein, highly conserved
RT in metazoans, and essential for embryogenesis in Caenorhabditis elegans.";
RL Exp. Cell Res. 313:1460-1472(2007).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Testis;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Involved in pre-mRNA splicing, specifically in spliceosome
CC disassembly during late-stage splicing events. {ECO:0000250}.
CC -!- SUBUNIT: Identified in the spliceosome C complex. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the TFP11/STIP family. {ECO:0000305}.
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DR EMBL; DQ342032; ABC69924.1; -; mRNA.
DR EMBL; BC121497; AAI21498.1; -; mRNA.
DR RefSeq; NP_001090845.1; NM_001097376.1.
DR AlphaFoldDB; Q0IIX9; -.
DR SMR; Q0IIX9; -.
DR STRING; 8364.ENSXETP00000008231; -.
DR PaxDb; Q0IIX9; -.
DR PRIDE; Q0IIX9; -.
DR DNASU; 100038256; -.
DR GeneID; 100038256; -.
DR KEGG; xtr:100038256; -.
DR CTD; 24144; -.
DR Xenbase; XB-GENE-984521; tfip11.
DR eggNOG; KOG2184; Eukaryota.
DR InParanoid; Q0IIX9; -.
DR OrthoDB; 1238995at2759; -.
DR Proteomes; UP000008143; Chromosome 4.
DR Proteomes; UP000790000; Unplaced.
DR Bgee; ENSXETG00000003784; Expressed in blastula and 13 other tissues.
DR GO; GO:0005681; C:spliceosomal complex; ISS:UniProtKB.
DR GO; GO:0071008; C:U2-type post-mRNA release spliceosomal complex; IBA:GO_Central.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0000390; P:spliceosomal complex disassembly; IBA:GO_Central.
DR InterPro; IPR000467; G_patch_dom.
DR InterPro; IPR022783; GCFC_dom.
DR InterPro; IPR024933; STIP.
DR InterPro; IPR022159; STIP/TFIP11_N.
DR InterPro; IPR045211; TFP11/STIP/Ntr1.
DR PANTHER; PTHR23329; PTHR23329; 1.
DR Pfam; PF01585; G-patch; 1.
DR Pfam; PF07842; GCFC; 1.
DR Pfam; PF12457; TIP_N; 1.
DR PIRSF; PIRSF017706; TFIP11; 1.
DR SMART; SM00443; G_patch; 1.
DR PROSITE; PS50174; G_PATCH; 1.
PE 2: Evidence at transcript level;
KW mRNA processing; mRNA splicing; Nucleus; Reference proteome; Spliceosome.
FT CHAIN 1..825
FT /note="Tuftelin-interacting protein 11"
FT /id="PRO_0000342282"
FT DOMAIN 145..191
FT /note="G-patch"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00092"
FT REGION 1..135
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 31..66
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 85..116
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 120..134
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 357
FT /note="K -> Q (in Ref. 2; AAI21498)"
FT /evidence="ECO:0000305"
FT CONFLICT 662
FT /note="N -> T (in Ref. 2; AAI21498)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 825 AA; 95295 MW; B557F1B538D98E45 CRC64;
MSMSHLYGKD EDSDGVEMEN FEITDWDLQN EFNPNRRKHF QTKEEATYGM WAERDSDDER
PSFGGKRSRD YSAPVNFISA GIRKPAAEEK SDSDSDSETQ ARRETFPKDF EAKKLRTGGN
FKPSQRTFAG GIKSNTDFGS WERHTKGIGQ KLLQKMGYVQ GRGLGKNAQG IIAPIEAKQR
KGKGAVGAYG SERTKQSIKD FPVVDSEEEE EKEFQKEMSQ WRKDPGGGKK KPKYSYKTVE
ELKAKGKVGK SLSAPQKEIS QVKVIDMTGR EQKVYYSYSQ LAHKHNIPGE APGQGAKEEK
PQGFALPELE HNLQLLIDMT EQEIIQNDRQ LQYEQDMVVN LTHELEKLSE VLEREEKAIQ
NLSKVLETVE ECERRIQPMC DNPLTLEECA RIFEMLQDKY YEEYKMSEKA DLSVAIVYPL
MKDYFKDWNP LRDPTYGTDV MSKWKNLLEE GHLLSHSAHD ASMDPYHRLL WETWVPLLRS
IIAQWQPRNC APMVDFLDCW VHLLPVWILD NILDQLIFPK LQKEVENWNP LTDTVPIHSW
IHPWLPLMQS RLEPLFSPIR NKLANALQKW HPSDSSAKLI LQPWKEVFTP GSWEAFMVKN
ILPKLGMCLS EFVINPHQQH MEVFHWVTDW EGMVSLSSIV GILEKHFFPK WLQVLCSWLS
NNPNYEEITK WYLGWKSMFS DLVLAHPAIK DKFNEALDIM NRAVSSSVGA YMQPGARESI
AYLTQTERRK DFQYEAMQER RDAESIAQRG IGAAAAVPMN FKDLIQSKAE EHNIVFMPLI
GKRHEGKQLY NFNRIVIYID RGVVFVQGEK TWVPTSLQSL IDMAK