TG124_CAEEL
ID TG124_CAEEL Reviewed; 402 AA.
AC Q09524;
DT 01-FEB-1996, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1996, sequence version 1.
DT 03-AUG-2022, entry version 121.
DE RecName: Full=Probable tRNA pseudouridine synthase tag-124;
DE EC=5.4.99.-;
DE AltName: Full=tRNA pseudouridylate synthase;
DE AltName: Full=tRNA-uridine isomerase;
GN Name=tag-124; ORFNames=E02H1.3;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
CC -!- FUNCTION: Formation of pseudouridine at position 38 and 39 in the
CC anticodon stem and loop of transfer RNAs. {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a uridine in tRNA = a pseudouridine in tRNA;
CC Xref=Rhea:RHEA:54572, Rhea:RHEA-COMP:13339, Rhea:RHEA-COMP:13934,
CC ChEBI:CHEBI:65314, ChEBI:CHEBI:65315;
CC -!- SIMILARITY: Belongs to the tRNA pseudouridine synthase TruA family.
CC {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; Z47075; CAA87378.1; -; Genomic_DNA.
DR PIR; T20413; T20413.
DR RefSeq; NP_496062.3; NM_063661.7.
DR AlphaFoldDB; Q09524; -.
DR SMR; Q09524; -.
DR STRING; 6239.E02H1.3; -.
DR EPD; Q09524; -.
DR PaxDb; Q09524; -.
DR PeptideAtlas; Q09524; -.
DR EnsemblMetazoa; E02H1.3.1; E02H1.3.1; WBGene00006473.
DR GeneID; 174509; -.
DR KEGG; cel:CELE_E02H1.3; -.
DR UCSC; E02H1.3.1; c. elegans.
DR CTD; 174509; -.
DR WormBase; E02H1.3; CE01538; WBGene00006473; tag-124.
DR eggNOG; KOG2554; Eukaryota.
DR GeneTree; ENSGT00950000183160; -.
DR HOGENOM; CLU_014673_2_0_1; -.
DR InParanoid; Q09524; -.
DR OMA; NLFRCDF; -.
DR OrthoDB; 1093493at2759; -.
DR PhylomeDB; Q09524; -.
DR PRO; PR:Q09524; -.
DR Proteomes; UP000001940; Chromosome II.
DR Bgee; WBGene00006473; Expressed in germ line (C elegans) and 4 other tissues.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0009982; F:pseudouridine synthase activity; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:1990481; P:mRNA pseudouridine synthesis; IBA:GO_Central.
DR GO; GO:0031119; P:tRNA pseudouridine synthesis; IBA:GO_Central.
DR CDD; cd02569; PseudoU_synth_ScPus3; 1.
DR Gene3D; 3.30.70.580; -; 1.
DR Gene3D; 3.30.70.660; -; 1.
DR HAMAP; MF_00171; TruA; 1.
DR InterPro; IPR020103; PsdUridine_synth_cat_dom_sf.
DR InterPro; IPR001406; PsdUridine_synth_TruA.
DR InterPro; IPR020097; PsdUridine_synth_TruA_a/b_dom.
DR InterPro; IPR020095; PsdUridine_synth_TruA_C.
DR InterPro; IPR041707; Pus3-like.
DR InterPro; IPR020094; TruA/RsuA/RluB/E/F_N.
DR PANTHER; PTHR11142; PTHR11142; 1.
DR Pfam; PF01416; PseudoU_synth_1; 1.
DR SUPFAM; SSF55120; SSF55120; 1.
DR TIGRFAMs; TIGR00071; hisT_truA; 1.
PE 3: Inferred from homology;
KW Isomerase; Reference proteome; tRNA processing.
FT CHAIN 1..402
FT /note="Probable tRNA pseudouridine synthase tag-124"
FT /id="PRO_0000057523"
FT REGION 383..402
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT ACT_SITE 85
FT /note="Nucleophile"
FT /evidence="ECO:0000250"
SQ SEQUENCE 402 AA; 46291 MW; E2E6D61489BC85A5 CRC64;
MGSKRVCPDA NNSVKSKKAK TLDFLAHPRR KIAIQFFYLG WEHDGLVQQP HTQNTVENHI
MQALIKTHLI EDWTKCDFSR CGRTDKGVSA FKQTAAMVVR SLCPGDSGVF WSDSTQEHQK
VDYKASGEEL PYVKMLNGVL PKTIRVFAWA PVAQTFNARF DCNRRTYKYS FAKADLNLEK
MRQGAELLVG EHDFSNFCQI DMNEKRLLQS YVRKVYEVKV EQVSTHPEND MYSMVELTVS
GSGFLWHMIR YIVTILQEIG RENEQPSLIS QLLDLKKYPS RPQYTLASDT PLCLFDCGYK
SEDVEWKVHD YTLKSTVTGL QKTWATYQAR SRMMENMLGE LTGMAEFSSG DANKGLHEFV
QDRPIPSNYI RFENRKMCES LESKKEKMAE KKKNGEESSD KL