TG250_CAEEL
ID TG250_CAEEL Reviewed; 610 AA.
AC P34344; C8JQN7; Q4TTD4;
DT 01-FEB-1994, integrated into UniProtKB/Swiss-Prot.
DT 06-JUN-2002, sequence version 2.
DT 03-AUG-2022, entry version 129.
DE RecName: Full=Putative protein tag-250;
GN Name=tag-250; ORFNames=C29E4.5;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=7906398; DOI=10.1038/368032a0;
RA Wilson R., Ainscough R., Anderson K., Baynes C., Berks M., Bonfield J.,
RA Burton J., Connell M., Copsey T., Cooper J., Coulson A., Craxton M.,
RA Dear S., Du Z., Durbin R., Favello A., Fraser A., Fulton L., Gardner A.,
RA Green P., Hawkins T., Hillier L., Jier M., Johnston L., Jones M.,
RA Kershaw J., Kirsten J., Laisster N., Latreille P., Lightning J., Lloyd C.,
RA Mortimore B., O'Callaghan M., Parsons J., Percy C., Rifken L., Roopra A.,
RA Saunders D., Shownkeen R., Sims M., Smaldon N., Smith A., Smith M.,
RA Sonnhammer E., Staden R., Sulston J., Thierry-Mieg J., Thomas K.,
RA Vaudin M., Vaughan K., Waterston R., Watson A., Weinstock L.,
RA Wilkinson-Sproat J., Wohldman P.;
RT "2.2 Mb of contiguous nucleotide sequence from chromosome III of C.
RT elegans.";
RL Nature 368:32-38(1994).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND ALTERNATIVE SPLICING.
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
CC -!- INTERACTION:
CC P34344; Q9XUJ2: CELE_W09D6.5; NbExp=4; IntAct=EBI-2414102, EBI-2414107;
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=a;
CC IsoId=P34344-1; Sequence=Displayed;
CC Name=b;
CC IsoId=P34344-2; Sequence=VSP_015953, VSP_015954;
CC -!- SEQUENCE CAUTION:
CC Sequence=CCD66014.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=CCD66015.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; FO080706; CCD66014.1; ALT_SEQ; Genomic_DNA.
DR EMBL; FO080706; CCD66015.1; ALT_SEQ; Genomic_DNA.
DR PIR; S44773; S44773.
DR RefSeq; NP_001021188.2; NM_001026017.3.
DR RefSeq; NP_001021189.2; NM_001026018.2.
DR AlphaFoldDB; P34344; -.
DR BioGRID; 41320; 1.
DR IntAct; P34344; 2.
DR STRING; 6239.C29E4.5a; -.
DR EPD; P34344; -.
DR PaxDb; P34344; -.
DR PeptideAtlas; P34344; -.
DR EnsemblMetazoa; C29E4.5a.1; C29E4.5a.1; WBGene00016203.
DR EnsemblMetazoa; C29E4.5b.1; C29E4.5b.1; WBGene00016203.
DR EnsemblMetazoa; C29E4.5b.2; C29E4.5b.2; WBGene00016203.
DR GeneID; 176113; -.
DR KEGG; cel:CELE_C29E4.5; -.
DR UCSC; C29E4.5a; c. elegans. [P34344-1]
DR CTD; 176113; -.
DR WormBase; C29E4.5a; CE43801; WBGene00016203; tag-250.
DR WormBase; C29E4.5b; CE43781; WBGene00016203; tag-250.
DR eggNOG; ENOG502S9EE; Eukaryota.
DR HOGENOM; CLU_478355_0_0_1; -.
DR InParanoid; P34344; -.
DR OrthoDB; 367599at2759; -.
DR PRO; PR:P34344; -.
DR Proteomes; UP000001940; Chromosome III.
DR Bgee; WBGene00016203; Expressed in pharyngeal muscle cell (C elegans) and 4 other tissues.
DR GO; GO:0043186; C:P granule; IBA:GO_Central.
DR GO; GO:0030719; P:P granule organization; IBA:GO_Central.
DR GO; GO:0034587; P:piRNA metabolic process; IBA:GO_Central.
DR Gene3D; 2.40.50.90; -; 1.
DR InterPro; IPR035437; SNase_OB-fold_sf.
DR InterPro; IPR002999; Tudor.
DR Pfam; PF00567; TUDOR; 2.
DR SMART; SM00333; TUDOR; 2.
PE 1: Evidence at protein level;
KW Alternative splicing; Reference proteome; Repeat.
FT CHAIN 1..610
FT /note="Putative protein tag-250"
FT /id="PRO_0000183184"
FT DOMAIN 149..260
FT /note="Tudor 1"
FT DOMAIN 386..506
FT /note="Tudor 2"
FT VAR_SEQ 114..136
FT /note="VISTDREPTADELKKIKQRKENE -> ACPIRINTTPPLSSLTLIRIWRN
FT (in isoform b)"
FT /evidence="ECO:0000305"
FT /id="VSP_015953"
FT VAR_SEQ 137..610
FT /note="Missing (in isoform b)"
FT /evidence="ECO:0000305"
FT /id="VSP_015954"
SQ SEQUENCE 610 AA; 67333 MW; 2E5F0412B52BC544 CRC64;
MSAVNGLVPS TIFDRINSDM DVSEEMEEIR EVLYEMIKTN FPMGVAATHL SEKYHEEFVS
KGLGRELPED WIQQVTAAEE FEAQTRGPIT ILFVRLSNTS SFKRPPINSV NVRVISTDRE
PTADELKKIK QRKENEPTEH AKTLSQQSVA LKEGSTVSIV YADSPKRFFI RALADDDQYE
KIGTTLAEIY AQETPPSALD SRVAIYEIVA GGAYALQDSN GTWFRVIAKQ PPQSGQVMCH
FVDVGVCEKF PVAAIRLLPP AVHPVMSIGS MAREVRMDVS EEESLRLNNK FVDLTFETKD
DGIQVPINLT LSKFDSSDSE SLPVVDLQSS DGLSITEFLK KPSGVVRLST PTKTTSPITP
ASASTSSLTC LFDKPATIQP MTVAQMPMSA FPANAIFAAG PTDISLRQLS LDPMPDYMYA
KLKDECALPD SQLESSPDFG GFYAAFIDDR WERVQCIRAS KIDKQAYCVY LLDVGAFQYV
RKEAMRRLNS TSPFKKMLMF KCKIGGIKPV AGGEVWSRES HEAVREFFEA ACGEPVVVEP
TQPGWSQWKQ LNAPAVPTCE ARLSCCGRDI GDWLIACGLA LPINAPIPSP NSQSLLTFVP
TPINIVGRNI