TGAL4_ORYSJ
ID TGAL4_ORYSJ Reviewed; 484 AA.
AC Q53Q70;
DT 07-SEP-2016, integrated into UniProtKB/Swiss-Prot.
DT 24-MAY-2005, sequence version 1.
DT 03-AUG-2022, entry version 124.
DE RecName: Full=Transcription factor TGAL4 {ECO:0000305};
DE AltName: Full=bZIP transcription factor 79 {ECO:0000303|PubMed:18065552};
DE Short=OsbZIP79 {ECO:0000303|PubMed:18065552};
GN Name=TGAL4 {ECO:0000303|PubMed:24919709};
GN OrderedLocusNames=Os11g0152700 {ECO:0000312|EMBL:BAF27617.1},
GN LOC_Os11g05480 {ECO:0000312|EMBL:AAX94845.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16188032; DOI=10.1186/1741-7007-3-20;
RG The rice chromosomes 11 and 12 sequencing consortia;
RT "The sequence of rice chromosomes 11 and 12, rich in disease resistance
RT genes and recent gene duplications.";
RL BMC Biol. 3:20-20(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [6]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=18065552; DOI=10.1104/pp.107.112821;
RA Nijhawan A., Jain M., Tyagi A.K., Khurana J.P.;
RT "Genomic survey and gene expression analysis of the basic leucine zipper
RT transcription factor family in rice.";
RL Plant Physiol. 146:333-350(2008).
RN [7]
RP INTERACTION WITH NPR1/NH1 AND NPR3/NH3.
RX PubMed=24919709; DOI=10.1186/1471-2164-15-461;
RA Chern M., Bai W., Ruan D., Oh T., Chen X., Ronald P.C.;
RT "Interaction specificity and coexpression of rice NPR1 homologs 1 and 3
RT (NH1 and NH3), TGA transcription factors and negative regulator of
RT resistance (NRR) proteins.";
RL BMC Genomics 15:461-461(2014).
CC -!- FUNCTION: Transcriptional regulator involved in defense response.
CC {ECO:0000250|UniProtKB:Q7X993}.
CC -!- SUBUNIT: Interacts with NPR1/NH1 and NPR3/NH3.
CC {ECO:0000269|PubMed:24919709}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00978}.
CC -!- SIMILARITY: Belongs to the bZIP family. {ECO:0000305}.
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DR EMBL; AC116949; AAX94845.1; -; Genomic_DNA.
DR EMBL; DP000010; ABA91512.1; -; Genomic_DNA.
DR EMBL; AP008217; BAF27617.1; -; Genomic_DNA.
DR EMBL; AP014967; BAT12728.1; -; Genomic_DNA.
DR EMBL; AK069411; BAG91422.1; -; mRNA.
DR RefSeq; XP_015617800.1; XM_015762314.1.
DR AlphaFoldDB; Q53Q70; -.
DR SMR; Q53Q70; -.
DR STRING; 4530.OS11T0152700-01; -.
DR PaxDb; Q53Q70; -.
DR PRIDE; Q53Q70; -.
DR EnsemblPlants; Os11t0152700-01; Os11t0152700-01; Os11g0152700.
DR EnsemblPlants; Os11t0152700-02; Os11t0152700-02; Os11g0152700.
DR GeneID; 4349800; -.
DR Gramene; Os11t0152700-01; Os11t0152700-01; Os11g0152700.
DR Gramene; Os11t0152700-02; Os11t0152700-02; Os11g0152700.
DR KEGG; osa:4349800; -.
DR eggNOG; ENOG502QRFK; Eukaryota.
DR HOGENOM; CLU_024782_0_3_1; -.
DR InParanoid; Q53Q70; -.
DR OMA; FMGHMAI; -.
DR OrthoDB; 823978at2759; -.
DR PlantReactome; R-OSA-6788019; Salicylic acid signaling.
DR Proteomes; UP000000763; Chromosome 11.
DR Proteomes; UP000059680; Chromosome 11.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006952; P:defense response; IEA:UniProtKB-KW.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:InterPro.
DR InterPro; IPR004827; bZIP.
DR InterPro; IPR046347; bZIP_sf.
DR InterPro; IPR025422; TGA_domain.
DR Pfam; PF00170; bZIP_1; 1.
DR Pfam; PF14144; DOG1; 1.
DR SUPFAM; SSF57959; SSF57959; 1.
DR PROSITE; PS50217; BZIP; 1.
DR PROSITE; PS00036; BZIP_BASIC; 1.
DR PROSITE; PS51806; DOG1; 1.
PE 1: Evidence at protein level;
KW DNA-binding; Nucleus; Plant defense; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..484
FT /note="Transcription factor TGAL4"
FT /id="PRO_0000437018"
FT DOMAIN 178..222
FT /note="bZIP"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00978"
FT DOMAIN 241..455
FT /note="DOG1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01147"
FT REGION 1..22
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 84..137
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 155..181
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 180..200
FT /note="Basic motif"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00978"
FT REGION 206..220
FT /note="Leucine-zipper"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00978"
FT COMPBIAS 108..137
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 155..175
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 484 AA; 52930 MW; 16BEB8F057F7795F CRC64;
MGEASSSSGH PRQNPHVLGY GFHGAMPNSL PSANLFEQQG GANYFGELEE ALMQQVATLR
RTQQTATTTS TLHHGDTTPF STTATAAATA RPPPTLDIFP SWPMRSLHTP KEGSNVTADT
TDSESSSKNN SNQNASSDQH VLVGDMAGQF DQIPQQEQHK KMATNSPTHS SKTGKALDPK
TMRRLAQNRE AARKSRLRKK AYIQQLESSK LKLAQMEQDI HRARSQGLLL GAPGGNTSSG
AAMFDVDYAR WLEEDSQRMA ELHGGLHAHL PDSDLRAIVD DTLTHYDHLF NLKGMAAKAD
VFHLITGMWA TPAERCFLWM GGFRPSELLK TLTPQLDPLT EQQVVGICNL QQSSQQAEEA
LSQGLDQLHQ SLAETVAGGS PLDDPNVGSF MGHMAIALGQ LSNLEGFVIQ ADNLRQQTIH
QMHRILTVRQ AARCFLAIGE YHNRLRALSS LWASRPREIL VADEGNCGEL SIAAHPSESQ
YSAF
