BRF2_XENTR
ID BRF2_XENTR Reviewed; 519 AA.
AC A4QNR3;
DT 20-MAY-2008, integrated into UniProtKB/Swiss-Prot.
DT 15-MAY-2007, sequence version 1.
DT 03-AUG-2022, entry version 77.
DE RecName: Full=Transcription factor IIIB 50 kDa subunit;
DE AltName: Full=B-related factor 2;
DE Short=BRF-2;
GN Name=brf2;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Brain;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: General activator of RNA polymerase III transcription. Factor
CC exclusively required for RNA polymerase III transcription of genes with
CC promoter elements upstream of the initiation sites. Contributes to the
CC regulation of gene expression; functions as activator in the absence of
CC oxidative stress. Down-regulates expression of target genes in response
CC to oxidative stress. Overexpression protects cells against apoptosis in
CC response to oxidative stress. {ECO:0000250|UniProtKB:Q9HAW0}.
CC -!- SUBUNIT: Component of TFIIIB complexes. Interacts with TBP and forms a
CC ternary complex with TBp and target DNA sequences.
CC {ECO:0000250|UniProtKB:Q9HAW0}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:Q9HAW0}.
CC -!- PTM: In response to oxidative stress, a Cys-residue is reversibly
CC oxidized to cysteine sulfenic acid. This impairs formation of a ternary
CC complex with TBP and DNA and down-regulates expression of target genes
CC in response to oxidative stress. {ECO:0000250|UniProtKB:Q9HAW0}.
CC -!- SIMILARITY: Belongs to the TFIIB family. {ECO:0000305}.
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DR EMBL; BC136234; AAI36235.1; -; mRNA.
DR RefSeq; NP_001096549.1; NM_001103079.1.
DR AlphaFoldDB; A4QNR3; -.
DR SMR; A4QNR3; -.
DR STRING; 8364.ENSXETP00000060533; -.
DR PaxDb; A4QNR3; -.
DR DNASU; 100125194; -.
DR GeneID; 100125194; -.
DR KEGG; xtr:100125194; -.
DR CTD; 55290; -.
DR Xenbase; XB-GENE-964408; brf2.
DR eggNOG; KOG1598; Eukaryota.
DR InParanoid; A4QNR3; -.
DR OrthoDB; 1518547at2759; -.
DR Proteomes; UP000008143; Chromosome 3.
DR Proteomes; UP000790000; Unplaced.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0000126; C:transcription factor TFIIIB complex; ISS:UniProtKB.
DR GO; GO:0097550; C:transcription preinitiation complex; IBA:GO_Central.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0001006; F:RNA polymerase III type 3 promoter sequence-specific DNA binding; ISS:UniProtKB.
DR GO; GO:0017025; F:TBP-class protein binding; IBA:GO_Central.
DR GO; GO:0034599; P:cellular response to oxidative stress; ISS:UniProtKB.
DR GO; GO:0006352; P:DNA-templated transcription, initiation; IBA:GO_Central.
DR GO; GO:0006359; P:regulation of transcription by RNA polymerase III; ISS:UniProtKB.
DR GO; GO:0070897; P:transcription preinitiation complex assembly; IEA:InterPro.
DR InterPro; IPR036915; Cyclin-like_sf.
DR InterPro; IPR000812; TFIIB.
DR InterPro; IPR013150; TFIIB_cyclin.
DR InterPro; IPR013137; Znf_TFIIB.
DR PANTHER; PTHR11618; PTHR11618; 1.
DR Pfam; PF00382; TFIIB; 1.
DR SUPFAM; SSF47954; SSF47954; 1.
DR PROSITE; PS51134; ZF_TFIIB; 1.
PE 2: Evidence at transcript level;
KW Activator; Metal-binding; Nucleus; Oxidation; Reference proteome; Repeat;
KW Transcription; Transcription regulation; Zinc; Zinc-finger.
FT CHAIN 1..519
FT /note="Transcription factor IIIB 50 kDa subunit"
FT /id="PRO_0000337193"
FT REPEAT 173..249
FT /note="2"
FT ZN_FING 3..36
FT /note="TFIIB-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00469"
FT REGION 465..487
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 7
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00469"
FT BINDING 10
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00469"
FT BINDING 28
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00469"
FT BINDING 31
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00469"
FT MOD_RES 462
FT /note="Cysteine sulfenic acid (-SOH)"
FT /evidence="ECO:0000250|UniProtKB:Q9HAW0"
SQ SEQUENCE 519 AA; 57126 MW; 55564CD7F1E36AF6 CRC64;
MSGAKQCPDC GSSDIVEDAH YSQDQVVCAD CGCILSEGLI TTTAAEESHL QAVRFADSTG
ENDSMTVSKL RGIVRVRNIC RVLRLPDGFS DTAVSYYEQA YKHPLYHSVS IEKKEIIVGC
CVYITCRQHQ WPITMATICS LVYAKKELFA SIFLSIVQVL KLDVPSVSLQ NLVMSHCRSF
KLFKDSCEVP SHYAEKLDTV SERTVQTVEL AYETWLVTGR HPIPIITAAA YISWQSLLPA
RRLSCSLSRF CKLSDVDLPP PSAIRLRELQ GTLIKLSVYL PWLKVLSLNK KTVVQHLGDL
LRHRVFLLRK ALAVTEAELS RGTLADTEAQ LSRGTLADTE AQLSRGTLAD TEAQLSRGTL
ADTEAQLSRG TLADTEAQLS RGTLADTEAQ LSRGTLADTE AQLSRGTLAD TEAQLSRGTL
ADTVAQLSRG TLADTEAQLS RGTKALSSND QPNSTFVFLP PCVSNPRKRS RSIPFPRGHL
DITGDEDISD SEIEQYLRTP AEMKEFEQAL NRDDELPNA