THOC7_DICDI
ID THOC7_DICDI Reviewed; 215 AA.
AC Q552L5;
DT 02-SEP-2008, integrated into UniProtKB/Swiss-Prot.
DT 24-MAY-2005, sequence version 1.
DT 25-MAY-2022, entry version 75.
DE RecName: Full=THO complex subunit 7 homolog;
GN Name=thoc7; ORFNames=DDB_G0275979;
OS Dictyostelium discoideum (Slime mold).
OC Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales;
OC Dictyosteliaceae; Dictyostelium.
OX NCBI_TaxID=44689;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AX4;
RX PubMed=12097910; DOI=10.1038/nature00847;
RA Gloeckner G., Eichinger L., Szafranski K., Pachebat J.A., Bankier A.T.,
RA Dear P.H., Lehmann R., Baumgart C., Parra G., Abril J.F., Guigo R.,
RA Kumpf K., Tunggal B., Cox E.C., Quail M.A., Platzer M., Rosenthal A.,
RA Noegel A.A.;
RT "Sequence and analysis of chromosome 2 of Dictyostelium discoideum.";
RL Nature 418:79-85(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AX4;
RX PubMed=15875012; DOI=10.1038/nature03481;
RA Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R.,
RA Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B.,
RA Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T.,
RA Lehmann R., Hamlin N., Davies R., Gaudet P., Fey P., Pilcher K., Chen G.,
RA Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N.,
RA Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E.,
RA Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N.,
RA Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D.,
RA Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T.,
RA Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D.,
RA Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A.,
RA Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M.,
RA Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A.,
RA Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y.,
RA Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C.,
RA Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R.,
RA Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.;
RT "The genome of the social amoeba Dictyostelium discoideum.";
RL Nature 435:43-57(2005).
CC -!- FUNCTION: May act as component of the THO subcomplex of the TREX
CC complex which is thought to couple mRNA transcription, processing and
CC nuclear export, and which specifically associates with spliced mRNA and
CC not with unspliced pre-mRNA. {ECO:0000250|UniProtKB:Q6I9Y2}.
CC -!- SUBUNIT: Component of the THO subcomplex of the transcription/export
CC (TREX) complex which seems to have a dynamic structure involving ATP-
CC dependent remodeling. {ECO:0000250|UniProtKB:Q6I9Y2}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250|UniProtKB:Q6I9Y2}. Nucleus
CC {ECO:0000250|UniProtKB:Q6I9Y2}. Nucleus speckle
CC {ECO:0000250|UniProtKB:Q6I9Y2}.
CC -!- SIMILARITY: Belongs to the THOC7 family. {ECO:0000305}.
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DR EMBL; AAFI02000013; EAL69446.1; -; Genomic_DNA.
DR RefSeq; XP_643367.1; XM_638275.1.
DR AlphaFoldDB; Q552L5; -.
DR SMR; Q552L5; -.
DR STRING; 44689.DDB0233570; -.
DR PaxDb; Q552L5; -.
DR EnsemblProtists; EAL69446; EAL69446; DDB_G0275979.
DR GeneID; 8620250; -.
DR KEGG; ddi:DDB_G0275979; -.
DR dictyBase; DDB_G0275979; thoc7.
DR eggNOG; KOG3215; Eukaryota.
DR HOGENOM; CLU_1285362_0_0_1; -.
DR InParanoid; Q552L5; -.
DR OMA; WANSKND; -.
DR PhylomeDB; Q552L5; -.
DR PRO; PR:Q552L5; -.
DR Proteomes; UP000002195; Chromosome 2.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
DR GO; GO:0000445; C:THO complex part of transcription export complex; IBA:GO_Central.
DR GO; GO:0006406; P:mRNA export from nucleus; IBA:GO_Central.
DR GO; GO:0006397; P:mRNA processing; IEA:InterPro.
DR InterPro; IPR008501; THOC7/Mft1.
DR Pfam; PF05615; THOC7; 1.
PE 3: Inferred from homology;
KW Coiled coil; Cytoplasm; Nucleus; Reference proteome.
FT CHAIN 1..215
FT /note="THO complex subunit 7 homolog"
FT /id="PRO_0000349101"
FT REGION 193..215
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 88..191
FT /evidence="ECO:0000255"
SQ SEQUENCE 215 AA; 25304 MW; FE97801F5C3C8456 CRC64;
MKLIKKLLED EEDSFFKNKI VFKNFVIKKV FKKYLQFINV TTGNNENSSV DLQSLCTQLI
NEFGHLELSV QKAQTISETC TDETLYYQQL SKQREIEIEN EKKEIAILKE TLDYEKKQRQ
YKEQYLALYK AINEKPSTEQ TEKEIEKAQK ELNEITDQTN KTTSKLELRT KQFQLLLHTL
NELEKNLDES IPFIENSNNN NNNSNSDQSN TPMES