THOC7_XENTR
ID THOC7_XENTR Reviewed; 199 AA.
AC Q6P643;
DT 13-NOV-2007, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 74.
DE RecName: Full=THO complex subunit 7 homolog;
GN Name=thoc7;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (NOV-2003) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Required for efficient export of polyadenylated RNA. Acts as
CC component of the THO subcomplex of the TREX complex which is thought to
CC couple mRNA transcription, processing and nuclear export, and which
CC specifically associates with spliced mRNA and not with unspliced pre-
CC mRNA. TREX is recruited to spliced mRNAs by a transcription-independent
CC mechanism, binds to mRNA upstream of the exon-junction complex (EJC)
CC and is recruited in a splicing- and cap-dependent manner to a region
CC near the 5' end of the mRNA where it functions in mRNA export to the
CC cytoplasm via the TAP/NFX1 pathway. {ECO:0000250|UniProtKB:Q6I9Y2}.
CC -!- SUBUNIT: Component of the THO subcomplex of the transcription/export
CC (TREX) complex which seems to have a dynamic structure involving ATP-
CC dependent remodeling. {ECO:0000250|UniProtKB:Q6I9Y2}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250|UniProtKB:Q6I9Y2}. Nucleus
CC {ECO:0000250|UniProtKB:Q6I9Y2}. Nucleus speckle
CC {ECO:0000250|UniProtKB:Q6I9Y2}.
CC -!- SIMILARITY: Belongs to the THOC7 family. {ECO:0000305}.
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DR EMBL; BC062491; AAH62491.1; -; mRNA.
DR RefSeq; NP_989103.1; NM_203772.1.
DR AlphaFoldDB; Q6P643; -.
DR SMR; Q6P643; -.
DR STRING; 8364.ENSXETP00000056903; -.
DR DNASU; 394707; -.
DR Ensembl; ENSXETT00000056903; ENSXETP00000056903; ENSXETG00000006539.
DR GeneID; 394707; -.
DR KEGG; xtr:394707; -.
DR CTD; 80145; -.
DR Xenbase; XB-GENE-956290; thoc7.
DR eggNOG; KOG3215; Eukaryota.
DR InParanoid; Q6P643; -.
DR OrthoDB; 1394258at2759; -.
DR Reactome; R-XTR-159236; Transport of Mature mRNA derived from an Intron-Containing Transcript.
DR Reactome; R-XTR-72187; mRNA 3'-end processing.
DR Proteomes; UP000008143; Chromosome 4.
DR Proteomes; UP000790000; Unplaced.
DR Bgee; ENSXETG00000006539; Expressed in embryo and 14 other tissues.
DR ExpressionAtlas; Q6P643; baseline.
DR GO; GO:0005737; C:cytoplasm; ISS:UniProtKB.
DR GO; GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; ISS:UniProtKB.
DR GO; GO:0000445; C:THO complex part of transcription export complex; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006406; P:mRNA export from nucleus; IBA:GO_Central.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR InterPro; IPR008501; THOC7/Mft1.
DR Pfam; PF05615; THOC7; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Cytoplasm; mRNA processing; mRNA splicing; mRNA transport;
KW Nucleus; Reference proteome; RNA-binding; Transport.
FT CHAIN 1..199
FT /note="THO complex subunit 7 homolog"
FT /id="PRO_0000310758"
FT COILED 73..192
FT /evidence="ECO:0000255"
SQ SEQUENCE 199 AA; 23146 MW; 9318AF3DFFD5591B CRC64;
MGAVTDDEVI RKRLLIDGDG AGDDRRINLL VKSFLKWCNS GSQEEGQYQR MLSSLSQCEF
SMGKTLLVHD MNLREMENYE KIYVDIESSI AAAHEKIAEC KKQILQAKRI RKNRQEYDAL
AKVIQQHPDR HETLKQLEAL DKELKQLSHT KENVEDKLEL RRKQFHVLLS TIHELQQTLE
NDDKLAEESQ ESPMETQNP