BRXL2_ARATH
ID BRXL2_ARATH Reviewed; 374 AA.
AC Q8GYL9; Q9LVJ9; Q9LVK0;
DT 05-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2003, sequence version 1.
DT 25-MAY-2022, entry version 90.
DE RecName: Full=Protein Brevis radix-like 2;
DE Short=AtBRXL2;
GN Name=BRXL2; OrderedLocusNames=At3g14000; ORFNames=MDC16.12, MDC16.13;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10819329; DOI=10.1093/dnares/7.2.131;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence
RT features of the regions of 4,504,864 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:131-135(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=11910074; DOI=10.1126/science.1071006;
RA Seki M., Narusaka M., Kamiya A., Ishida J., Satou M., Sakurai T.,
RA Nakajima M., Enju A., Akiyama K., Oono Y., Muramatsu M., Hayashizaki Y.,
RA Kawai J., Carninci P., Itoh M., Ishii Y., Arakawa T., Shibata K.,
RA Shinagawa A., Shinozaki K.;
RT "Functional annotation of a full-length Arabidopsis cDNA collection.";
RL Science 296:141-145(2002).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Bautista V.R., Kim C.J., Chen H., Quinitio C., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP IDENTIFICATION.
RX PubMed=15031265; DOI=10.1101/gad.1187704;
RA Mouchel C.F., Briggs G.C., Hardtke C.S.;
RT "Natural genetic variation in Arabidopsis identifies BREVIS RADIX, a novel
RT regulator of cell proliferation and elongation in the root.";
RL Genes Dev. 18:700-714(2004).
RN [6]
RP GENE FAMILY, DISRUPTION PHENOTYPE, AND TISSUE SPECIFICITY.
RX PubMed=16514016; DOI=10.1104/pp.105.075382;
RA Briggs G.C., Mouchel C.F., Hardtke C.S.;
RT "Characterization of the plant-specific BREVIS RADIX gene family reveals
RT limited genetic redundancy despite high sequence conservation.";
RL Plant Physiol. 140:1306-1316(2006).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- TISSUE SPECIFICITY: Expressed in roots. {ECO:0000269|PubMed:16514016}.
CC -!- DISRUPTION PHENOTYPE: No visible phenotype.
CC {ECO:0000269|PubMed:16514016}.
CC -!- SIMILARITY: Belongs to the BRX family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB02330.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=BAB02331.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB019229; BAB02330.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AB019229; BAB02331.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002686; AEE75450.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE75451.1; -; Genomic_DNA.
DR EMBL; AK117522; BAC42185.1; -; mRNA.
DR EMBL; BT029002; ABI93911.1; -; mRNA.
DR RefSeq; NP_188016.2; NM_112254.3.
DR RefSeq; NP_974309.1; NM_202580.2.
DR AlphaFoldDB; Q8GYL9; -.
DR SMR; Q8GYL9; -.
DR BioGRID; 5948; 1.
DR STRING; 3702.AT3G14000.2; -.
DR iPTMnet; Q8GYL9; -.
DR PaxDb; Q8GYL9; -.
DR PRIDE; Q8GYL9; -.
DR ProteomicsDB; 240481; -.
DR EnsemblPlants; AT3G14000.1; AT3G14000.1; AT3G14000.
DR EnsemblPlants; AT3G14000.2; AT3G14000.2; AT3G14000.
DR GeneID; 820614; -.
DR Gramene; AT3G14000.1; AT3G14000.1; AT3G14000.
DR Gramene; AT3G14000.2; AT3G14000.2; AT3G14000.
DR KEGG; ath:AT3G14000; -.
DR Araport; AT3G14000; -.
DR TAIR; locus:2088212; AT3G14000.
DR eggNOG; ENOG502QTYG; Eukaryota.
DR HOGENOM; CLU_033380_0_1_1; -.
DR InParanoid; Q8GYL9; -.
DR OMA; CSYRRTG; -.
DR OrthoDB; 995616at2759; -.
DR PhylomeDB; Q8GYL9; -.
DR PRO; PR:Q8GYL9; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q8GYL9; baseline and differential.
DR Genevisible; Q8GYL9; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR InterPro; IPR013591; Brevis_radix_dom.
DR InterPro; IPR044532; BRX-like.
DR InterPro; IPR027988; BRX_N.
DR PANTHER; PTHR46058; PTHR46058; 1.
DR Pfam; PF08381; BRX; 2.
DR Pfam; PF13713; BRX_N; 1.
DR PROSITE; PS51514; BRX; 2.
PE 2: Evidence at transcript level;
KW Nucleus; Reference proteome; Repeat.
FT CHAIN 1..374
FT /note="Protein Brevis radix-like 2"
FT /id="PRO_0000373823"
FT DOMAIN 143..198
FT /note="BRX 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00847"
FT DOMAIN 319..374
FT /note="BRX 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00847"
FT REGION 12..43
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 57..80
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 205..316
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 18..36
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 61..80
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 205..232
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 246..291
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 292..307
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 374 AA; 41863 MW; 62134A124CF75AEC CRC64;
MLTCIACTKQ LNTNNGGSKK QEEDEEEEDR VIETPRSKQI KSLTSQIKDM AVKASGAYKS
CKPCSGSSNQ NKNRSYADSD VASNSGRFRY AYKRAGSGSS TPKILGKEME SRLKGFLSGE
GTPESMSGRT ESTVFMEEED ELKEWVAQVE PGVLITFVSL PEGGNDMKRI RFSREMFDKW
QAQKWWAENF DKVMELYNVQ QFNQQSVPLP TPPRSEDGSS RIQSTKNGPA TPPLNKECSR
GKGYASSGSL AHQPTTQTQS RHHDSSGLAT TPKLSSISGT KTETSSVDES ARSSFSREEE
EADHSGEELS VSNASDIETE WVEQDEAGVY ITIRALPDGT RELRRVRFSR EKFGETNARL
WWEQNRARIQ QQYL
