BRXL2_ORYSJ
ID BRXL2_ORYSJ Reviewed; 411 AA.
AC Q6ZIK7; A0A0P0VNI5;
DT 05-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 85.
DE RecName: Full=Protein Brevis radix-like 2;
DE Short=OsBRXL2;
GN Name=BRXL2; OrderedLocusNames=Os02g0700700, LOC_Os02g47230;
GN ORFNames=OJ1111_E07.14, OsJ_08053;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [6]
RP GENE FAMILY.
RX PubMed=16514016; DOI=10.1104/pp.105.075382;
RA Briggs G.C., Mouchel C.F., Hardtke C.S.;
RT "Characterization of the plant-specific BREVIS RADIX gene family reveals
RT limited genetic redundancy despite high sequence conservation.";
RL Plant Physiol. 140:1306-1316(2006).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the BRX family. {ECO:0000305}.
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DR EMBL; AP003994; BAD07522.1; -; Genomic_DNA.
DR EMBL; AP008208; BAF09756.1; -; Genomic_DNA.
DR EMBL; AP014958; BAS80467.1; -; Genomic_DNA.
DR EMBL; CM000139; EEE57633.1; -; Genomic_DNA.
DR EMBL; AK101598; BAG95144.1; -; mRNA.
DR RefSeq; XP_015626445.1; XM_015770959.1.
DR AlphaFoldDB; Q6ZIK7; -.
DR SMR; Q6ZIK7; -.
DR STRING; 4530.OS02T0700700-01; -.
DR PaxDb; Q6ZIK7; -.
DR PRIDE; Q6ZIK7; -.
DR EnsemblPlants; Os02t0700700-01; Os02t0700700-01; Os02g0700700.
DR GeneID; 4330435; -.
DR Gramene; Os02t0700700-01; Os02t0700700-01; Os02g0700700.
DR KEGG; osa:4330435; -.
DR eggNOG; ENOG502QU4N; Eukaryota.
DR HOGENOM; CLU_033380_0_0_1; -.
DR InParanoid; Q6ZIK7; -.
DR OMA; YTYMRTT; -.
DR OrthoDB; 773657at2759; -.
DR Proteomes; UP000000763; Chromosome 2.
DR Proteomes; UP000007752; Chromosome 2.
DR Proteomes; UP000059680; Chromosome 2.
DR Genevisible; Q6ZIK7; OS.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR InterPro; IPR013591; Brevis_radix_dom.
DR InterPro; IPR044532; BRX-like.
DR InterPro; IPR027988; BRX_N.
DR PANTHER; PTHR46058; PTHR46058; 1.
DR Pfam; PF08381; BRX; 2.
DR Pfam; PF13713; BRX_N; 1.
DR PROSITE; PS51514; BRX; 2.
PE 2: Evidence at transcript level;
KW Nucleus; Reference proteome; Repeat.
FT CHAIN 1..411
FT /note="Protein Brevis radix-like 2"
FT /id="PRO_0000373827"
FT DOMAIN 161..217
FT /note="BRX 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00847"
FT DOMAIN 356..411
FT /note="BRX 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00847"
FT REGION 10..31
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 103..149
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 245..294
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 324..346
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 273..294
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 332..346
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 411 AA; 45265 MW; 742ED1111A8BA0F7 CRC64;
MLACIACSTK DGGEGGHRSA TATPNSGKSL TSQLKDMVLK FSGSGRHQYK SGGSPSLRTS
RFHRSSRLAA YPGIIDESGF TSDGAGEAYT YMRTTTASAG ARAAPSTWDL PPKVNHRSFQ
PRVIRSPSAS GVPSIGEEDY DDDDDDDDEE TVLLEEDRVP REWTAQVEPG VQITFVSIPG
GAGNDLKRIR FSREMFNKWE AQRWWGENYD RVVELYNVQT FSRQQGFSTP TSSVDEAMQR
DSFYSRVGST RESPAMMMPP PPPLPSSGAG REHPISRTAS SKAQLSSSSS VAAARPPFYP
STAVPDPSDH VWAHHFNLLN SAAAGPAAPY DPSRGTTSSR DEASVSISNA SDLEATEWVE
QDEPGVSITI REFGDGTREL RRVRFSRERF GEERAKVWWE QNRDRIHAQY L
