TI11A_ORYSJ
ID TI11A_ORYSJ Reviewed; 179 AA.
AC Q8GSI0;
DT 09-DEC-2015, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2003, sequence version 1.
DT 03-AUG-2022, entry version 115.
DE RecName: Full=Protein TIFY 11a {ECO:0000305};
DE Short=OsTIFY11a {ECO:0000303|PubMed:19618278};
DE AltName: Full=Jasmonate ZIM domain-containing protein 9 {ECO:0000305};
DE Short=OsJAZ9 {ECO:0000303|PubMed:19618278};
DE AltName: Full=OsJAZ3 {ECO:0000303|PubMed:21332845};
GN Name=TIFY11A {ECO:0000303|PubMed:19618278};
GN Synonyms=JAZ9 {ECO:0000303|PubMed:19618278};
GN OrderedLocusNames=Os03g0180800 {ECO:0000312|EMBL:BAF11080.1},
GN LOC_Os03g08310 {ECO:0000312|EMBL:ABF94309.1};
GN ORFNames=OsJ_09656 {ECO:0000312|EMBL:ABF94309.1},
GN OSJNBa0050H14.22 {ECO:0000312|EMBL:AAO13482.1},
GN OSJNBb0076N15.8 {ECO:0000312|EMBL:AAN65438.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16109971; DOI=10.1101/gr.3869505;
RG The rice chromosome 3 sequencing consortium;
RA Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B.,
RA Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T.,
RA Fadrosh D., Bera J., Weaver B., Jin S., Johri S., Reardon M., Webb K.,
RA Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T.,
RA Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R.,
RA Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J.,
RA Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S.,
RA Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M.,
RA Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M.,
RA Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L.,
RA O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R.,
RA Jin W., Lee H.R., Jiang J., Jackson S.;
RT "Sequence, annotation, and analysis of synteny between rice chromosome 3
RT and diverged grass species.";
RL Genome Res. 15:1284-1291(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [7]
RP FUNCTION, SUBCELLULAR LOCATION, GENE FAMILY, NOMENCLATURE, AND INDUCTION.
RX PubMed=19618278; DOI=10.1007/s11103-009-9524-8;
RA Ye H., Du H., Tang N., Li X., Xiong L.;
RT "Identification and expression profiling analysis of TIFY family genes
RT involved in stress and phytohormone responses in rice.";
RL Plant Mol. Biol. 71:291-305(2009).
RN [8]
RP INTERACTION WITH BHLH148.
RX PubMed=21332845; DOI=10.1111/j.1365-313x.2010.04477.x;
RA Seo J.S., Joo J., Kim M.J., Kim Y.K., Nahm B.H., Song S.I., Cheong J.J.,
RA Lee J.S., Kim J.K., Choi Y.D.;
RT "OsbHLH148, a basic helix-loop-helix protein, interacts with OsJAZ proteins
RT in a jasmonate signaling pathway leading to drought tolerance in rice.";
RL Plant J. 65:907-921(2011).
RN [9]
RP FUNCTION, INTERACTION WITH RSS3, AND SUBUNIT.
RC STRAIN=cv. Nipponbare;
RX PubMed=23715469; DOI=10.1105/tpc.113.112052;
RA Toda Y., Tanaka M., Ogawa D., Kurata K., Kurotani K., Habu Y., Ando T.,
RA Sugimoto K., Mitsuda N., Katoh E., Abe K., Miyao A., Hirochika H.,
RA Hattori T., Takeda S.;
RT "RICE SALT SENSITIVE3 forms a ternary complex with JAZ and class-C bHLH
RT factors and regulates jasmonate-induced gene expression and root cell
RT elongation.";
RL Plant Cell 25:1709-1725(2013).
RN [10]
RP INTERACTION WITH COI1A AND COI1B.
RX PubMed=23320078; DOI=10.1371/journal.pone.0052802;
RA Lee H.Y., Seo J.S., Cho J.H., Jung H., Kim J.K., Lee J.S., Rhee S.,
RA Do Choi Y.;
RT "Oryza sativa COI homologues restore jasmonate signal transduction in
RT Arabidopsis coi1-1 mutants.";
RL PLoS ONE 8:E52802-E52802(2013).
RN [11]
RP FUNCTION, AND INTERACTION WITH COI1A; BHLH062 AND NINJA1.
RX PubMed=25617318; DOI=10.1016/j.plantsci.2014.12.010;
RA Wu H., Ye H., Yao R., Zhang T., Xiong L.;
RT "OsJAZ9 acts as a transcriptional regulator in jasmonate signaling and
RT modulates salt stress tolerance in rice.";
RL Plant Sci. 232:1-12(2015).
RN [12]
RP FUNCTION, INTERACTION WITH MYB30, AND SUBCELLULAR LOCATION.
RC STRAIN=cv. Zhonghua 11;
RX PubMed=28062835; DOI=10.1104/pp.16.01725;
RA Lv Y., Yang M., Hu D., Yang Z., Ma S., Li X., Xiong L.;
RT "The OsMYB30 transcription factor suppresses cold tolerance by interacting
RT with a JAZ protein and suppressing beta-amylase expression.";
RL Plant Physiol. 173:1475-1491(2017).
CC -!- FUNCTION: Repressor of jasmonate (JA) responses. Forms a ternary
CC complex with RSS3 and BHLH94 to negatively regulate JA-responsive genes
CC (PubMed:23715469). Acts as positive regulator of tolerance to salt
CC stress (PubMed:19618278, PubMed:25617318). Involved in salt tolerance
CC by modulating potassium homeostasis through JA signaling and regulation
CC of the expression of potassium ion transporter genes. Acts as a
CC transcriptional regulator targeted by the SCF(COI1) E3 ubiquitin ligase
CC complexes in the JA signaling pathway, and interacts with BHLH062 that
CC may directly regulate the ion transporter genes (PubMed:25617318). Acts
CC as positive regulator of tolerance to dehydration stress
CC (PubMed:19618278). Acts as negative regulator of tolerance to cold
CC stress by interacting with MYB30 (PubMed:28062835).
CC {ECO:0000269|PubMed:19618278, ECO:0000269|PubMed:23715469,
CC ECO:0000269|PubMed:25617318, ECO:0000269|PubMed:28062835}.
CC -!- SUBUNIT: Interacts with BHLH148 (PubMed:21332845). Interacts with COI1A
CC in a coronatine-dependent manner (PubMed:23320078, PubMed:25617318).
CC Interacts with COI1B in a coronatine-dependent manner
CC (PubMed:23320078). Coronatine is an analog of jasmonoyl isoleucine (JA-
CC Ile) (PubMed:23320078). Interacts with RSS3. Forms a ternary complex
CC with RSS3 and BHLH094 in the nucleus (PubMed:23715469). Interacts with
CC BHLH062 and NINJA1 (PubMed:25617318). Interacts with MYB30
CC (PubMed:28062835). {ECO:0000269|PubMed:21332845,
CC ECO:0000269|PubMed:23320078, ECO:0000269|PubMed:23715469,
CC ECO:0000269|PubMed:25617318, ECO:0000269|PubMed:28062835}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00768,
CC ECO:0000269|PubMed:19618278, ECO:0000269|PubMed:28062835}.
CC -!- INDUCTION: By jasmonate, wounding, and cold, drought and salt stresses.
CC Down-regulated by abscisic acid (ABA). {ECO:0000269|PubMed:19618278}.
CC -!- DOMAIN: The jas domain (115-140) is required for interaction with COI1.
CC {ECO:0000250|UniProtKB:Q7XPM8}.
CC -!- PTM: Ubiquitinated. Targeted for degradation by the SCF(COI1) E3
CC ubiquitin ligase-proteasome pathway during jasmonate signaling.
CC {ECO:0000250|UniProtKB:Q7XPM8}.
CC -!- MISCELLANEOUS: Plants over-expressing TIFY11A/JAZ9 display increased
CC tolerance to salt and dehydration stresses (PubMed:19618278). Plants
CC silencing TIFY11A/JAZ9 exhibit decreased tolerance to salt stress
CC (PubMed:25617318). Plants over-expressing TIFY11A/JAZ9 display
CC decreased tolerance to cold stress (PubMed:28062835).
CC {ECO:0000269|PubMed:19618278, ECO:0000269|PubMed:25617318,
CC ECO:0000269|PubMed:28062835}.
CC -!- SIMILARITY: Belongs to the TIFY/JAZ family. {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AC125472; AAO13482.1; -; Genomic_DNA.
DR EMBL; AC126223; AAN65438.1; -; Genomic_DNA.
DR EMBL; DP000009; ABF94309.1; -; Genomic_DNA.
DR EMBL; AP008209; BAF11080.1; -; Genomic_DNA.
DR EMBL; AP014959; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CM000140; EAZ25816.1; -; Genomic_DNA.
DR EMBL; AK070649; BAG92077.1; -; mRNA.
DR RefSeq; XP_015629221.1; XM_015773735.1.
DR AlphaFoldDB; Q8GSI0; -.
DR SMR; Q8GSI0; -.
DR STRING; 4530.OS03T0180800-01; -.
DR PaxDb; Q8GSI0; -.
DR PRIDE; Q8GSI0; -.
DR EnsemblPlants; Os03t0180800-01; Os03t0180800-01; Os03g0180800.
DR GeneID; 4331832; -.
DR Gramene; Os03t0180800-01; Os03t0180800-01; Os03g0180800.
DR KEGG; osa:4331832; -.
DR eggNOG; ENOG502R5YE; Eukaryota.
DR HOGENOM; CLU_051749_3_2_1; -.
DR InParanoid; Q8GSI0; -.
DR OrthoDB; 1621604at2759; -.
DR PlantReactome; R-OSA-6787011; Jasmonic acid signaling.
DR Proteomes; UP000000763; Chromosome 3.
DR Proteomes; UP000007752; Chromosome 3.
DR Proteomes; UP000059680; Chromosome 3.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0031347; P:regulation of defense response; IBA:GO_Central.
DR GO; GO:2000022; P:regulation of jasmonic acid mediated signaling pathway; IBA:GO_Central.
DR GO; GO:0009611; P:response to wounding; IBA:GO_Central.
DR InterPro; IPR018467; CCT_CS.
DR InterPro; IPR040390; TIFY/JAZ.
DR InterPro; IPR010399; Tify_dom.
DR PANTHER; PTHR33077; PTHR33077; 1.
DR Pfam; PF09425; Jas_motif; 1.
DR Pfam; PF06200; tify; 1.
DR SMART; SM00979; TIFY; 1.
DR PROSITE; PS51320; TIFY; 1.
PE 1: Evidence at protein level;
KW Jasmonic acid signaling pathway; Nucleus; Reference proteome;
KW Stress response; Transcription; Transcription regulation; Ubl conjugation.
FT CHAIN 1..179
FT /note="Protein TIFY 11a"
FT /id="PRO_0000434853"
FT DOMAIN 62..97
FT /note="Tify"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00650"
FT MOTIF 115..140
FT /note="Jas"
FT /evidence="ECO:0000255"
FT MOTIF 117..124
FT /note="Nuclear localization signal"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00768"
SQ SEQUENCE 179 AA; 18395 MW; 1A14781E2D4573B4 CRC64;
MASTDPMTRR FAVACGVLSQ YVKANSSQPS TAAPVAQGVS GLMAAAAAAA AAPVVQEPGC
EVDGGGQQFT IFYAGKVVVI DRCTPAMAAE LMRFASAAQG GGGAPEAPPA LVDMPIARKA
SLKRFLAKRK ATPASARSSY VVRAAAAEEE QPPAKKAKAA VERREDWLAL GSLGHMHSR
