TI11B_ORYSJ
ID TI11B_ORYSJ Reviewed; 187 AA.
AC Q10QW3; A0A0P0VTU9; Q8GSA8;
DT 09-DEC-2015, integrated into UniProtKB/Swiss-Prot.
DT 22-AUG-2006, sequence version 1.
DT 03-AUG-2022, entry version 103.
DE RecName: Full=Protein TIFY 11b {ECO:0000305};
DE Short=OsTIFY11b {ECO:0000303|PubMed:19618278};
DE AltName: Full=Jasmonate ZIM domain-containing protein 10 {ECO:0000305};
DE Short=OsJAZ10 {ECO:0000303|PubMed:19618278};
DE AltName: Full=OsJAZ4 {ECO:0000303|PubMed:23320078};
GN Name=TIFY11B {ECO:0000303|PubMed:19618278};
GN Synonyms=JAZ10 {ECO:0000303|PubMed:19618278};
GN OrderedLocusNames=Os03g0181100 {ECO:0000312|EMBL:BAF11082.1},
GN LOC_Os03g08330 {ECO:0000312|EMBL:ABF94311.1};
GN ORFNames=OSJNBa0050H14.24 {ECO:0000312|EMBL:AAO13484.1},
GN OSJNBb0076N15.10 {ECO:0000312|EMBL:AAN65440.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16109971; DOI=10.1101/gr.3869505;
RG The rice chromosome 3 sequencing consortium;
RA Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B.,
RA Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T.,
RA Fadrosh D., Bera J., Weaver B., Jin S., Johri S., Reardon M., Webb K.,
RA Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T.,
RA Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R.,
RA Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J.,
RA Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S.,
RA Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M.,
RA Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M.,
RA Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L.,
RA O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R.,
RA Jin W., Lee H.R., Jiang J., Jackson S.;
RT "Sequence, annotation, and analysis of synteny between rice chromosome 3
RT and diverged grass species.";
RL Genome Res. 15:1284-1291(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [6]
RP GENE FAMILY, NOMENCLATURE, AND INDUCTION.
RX PubMed=19618278; DOI=10.1007/s11103-009-9524-8;
RA Ye H., Du H., Tang N., Li X., Xiong L.;
RT "Identification and expression profiling analysis of TIFY family genes
RT involved in stress and phytohormone responses in rice.";
RL Plant Mol. Biol. 71:291-305(2009).
RN [7]
RP INTERACTION WITH COI1B.
RX PubMed=23320078; DOI=10.1371/journal.pone.0052802;
RA Lee H.Y., Seo J.S., Cho J.H., Jung H., Kim J.K., Lee J.S., Rhee S.,
RA Do Choi Y.;
RT "Oryza sativa COI homologues restore jasmonate signal transduction in
RT Arabidopsis coi1-1 mutants.";
RL PLoS ONE 8:E52802-E52802(2013).
CC -!- FUNCTION: Repressor of jasmonate responses.
CC {ECO:0000250|UniProtKB:Q7XPM8}.
CC -!- SUBUNIT: Interacts with COI1B in a coronatine-dependent manner.
CC Coronatine is an analog of jasmonoyl isoleucine (JA-Ile).
CC {ECO:0000269|PubMed:23320078}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00768}.
CC -!- INDUCTION: By jasmonate, wounding, and cold, drought and salt stresses.
CC Down-regulated by abscisic acid (ABA). {ECO:0000269|PubMed:19618278}.
CC -!- DOMAIN: The jas domain (121-145) is required for interaction with COI1.
CC {ECO:0000250|UniProtKB:Q7XPM8}.
CC -!- PTM: Ubiquitinated. Targeted for degradation by the SCF(COI1) E3
CC ubiquitin ligase-proteasome pathway during jasmonate signaling.
CC {ECO:0000250|UniProtKB:Q7XPM8}.
CC -!- SIMILARITY: Belongs to the TIFY/JAZ family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAN65440.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
CC Sequence=AAO13484.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
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DR EMBL; AC125472; AAO13484.1; ALT_INIT; Genomic_DNA.
DR EMBL; AC126223; AAN65440.1; ALT_INIT; Genomic_DNA.
DR EMBL; DP000009; ABF94311.1; -; Genomic_DNA.
DR EMBL; AP008209; BAF11082.1; -; Genomic_DNA.
DR EMBL; AP014959; BAS82624.1; -; Genomic_DNA.
DR EMBL; AK067971; BAG90690.1; -; mRNA.
DR RefSeq; XP_015633147.1; XM_015777661.1.
DR AlphaFoldDB; Q10QW3; -.
DR STRING; 4530.OS03T0181100-01; -.
DR PaxDb; Q10QW3; -.
DR PRIDE; Q10QW3; -.
DR EnsemblPlants; Os03t0181100-01; Os03t0181100-01; Os03g0181100.
DR EnsemblPlants; Os03t0181100-02; Os03t0181100-02; Os03g0181100.
DR GeneID; 4331834; -.
DR Gramene; Os03t0181100-01; Os03t0181100-01; Os03g0181100.
DR Gramene; Os03t0181100-02; Os03t0181100-02; Os03g0181100.
DR KEGG; osa:4331834; -.
DR eggNOG; ENOG502RIU4; Eukaryota.
DR HOGENOM; CLU_051749_3_1_1; -.
DR InParanoid; Q10QW3; -.
DR OMA; KPAAWLG; -.
DR OrthoDB; 1626633at2759; -.
DR Proteomes; UP000000763; Chromosome 3.
DR Proteomes; UP000059680; Chromosome 3.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0031347; P:regulation of defense response; IBA:GO_Central.
DR GO; GO:2000022; P:regulation of jasmonic acid mediated signaling pathway; IBA:GO_Central.
DR GO; GO:0009611; P:response to wounding; IBA:GO_Central.
DR InterPro; IPR018467; CCT_CS.
DR InterPro; IPR040390; TIFY/JAZ.
DR InterPro; IPR010399; Tify_dom.
DR PANTHER; PTHR33077; PTHR33077; 1.
DR Pfam; PF09425; Jas_motif; 1.
DR Pfam; PF06200; tify; 1.
DR SMART; SM00979; TIFY; 1.
DR PROSITE; PS51320; TIFY; 1.
PE 1: Evidence at protein level;
KW Jasmonic acid signaling pathway; Nucleus; Reference proteome;
KW Transcription; Transcription regulation; Ubl conjugation.
FT CHAIN 1..187
FT /note="Protein TIFY 11b"
FT /id="PRO_0000434855"
FT DOMAIN 68..103
FT /note="Tify"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00650"
FT REGION 139..168
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 121..145
FT /note="Jas"
FT /evidence="ECO:0000255"
FT MOTIF 123..130
FT /note="Nuclear localization signal"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00768"
SQ SEQUENCE 187 AA; 19792 MW; 21A8FF044D9A4E8D CRC64;
MAMEGKSRRF AVACGVLSQY VRAEQKMAAA AGAAPARAVT TLSLMPGAEV VVEEEERREV
GEEEAGPATA PAAPLTIFYG GRMVVFEDFP ADKAAEVMRM ASSGMAAAPA QREGAALADM
PIMRKASLQR FFAKRKDRLA ATTPYARPSP AETKASEPEE KKTPTSWLDL AASASAAARR
DSLTIAL
