BRXL3_ORYSJ
ID BRXL3_ORYSJ Reviewed; 213 AA.
AC Q7XPT0; A0A0P0WEJ6;
DT 05-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2004, sequence version 2.
DT 03-AUG-2022, entry version 82.
DE RecName: Full=Putative protein Brevis radix-like 3;
DE Short=OsBRXL3;
GN Name=BRXL3; OrderedLocusNames=Os04g0600500, LOC_Os04g51172;
GN ORFNames=OSJNBa0083N12.14;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12447439; DOI=10.1038/nature01183;
RA Feng Q., Zhang Y., Hao P., Wang S., Fu G., Huang Y., Li Y., Zhu J., Liu Y.,
RA Hu X., Jia P., Zhang Y., Zhao Q., Ying K., Yu S., Tang Y., Weng Q.,
RA Zhang L., Lu Y., Mu J., Lu Y., Zhang L.S., Yu Z., Fan D., Liu X., Lu T.,
RA Li C., Wu Y., Sun T., Lei H., Li T., Hu H., Guan J., Wu M., Zhang R.,
RA Zhou B., Chen Z., Chen L., Jin Z., Wang R., Yin H., Cai Z., Ren S., Lv G.,
RA Gu W., Zhu G., Tu Y., Jia J., Zhang Y., Chen J., Kang H., Chen X., Shao C.,
RA Sun Y., Hu Q., Zhang X., Zhang W., Wang L., Ding C., Sheng H., Gu J.,
RA Chen S., Ni L., Zhu F., Chen W., Lan L., Lai Y., Cheng Z., Gu M., Jiang J.,
RA Li J., Hong G., Xue Y., Han B.;
RT "Sequence and analysis of rice chromosome 4.";
RL Nature 420:316-320(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP GENE FAMILY.
RX PubMed=16514016; DOI=10.1104/pp.105.075382;
RA Briggs G.C., Mouchel C.F., Hardtke C.S.;
RT "Characterization of the plant-specific BREVIS RADIX gene family reveals
RT limited genetic redundancy despite high sequence conservation.";
RL Plant Physiol. 140:1306-1316(2006).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the BRX family. {ECO:0000305}.
CC -!- CAUTION: This protein is shorter than the other members of the BRX
CC family and is missing the second DZC domain. Some internal exons might
CC be missing in this gene model prediction. {ECO:0000305}.
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DR EMBL; AL606683; CAE03473.2; -; Genomic_DNA.
DR EMBL; AP008210; BAF15675.1; -; Genomic_DNA.
DR EMBL; AP014960; BAS90834.1; -; Genomic_DNA.
DR AlphaFoldDB; Q7XPT0; -.
DR SMR; Q7XPT0; -.
DR STRING; 4530.OS04T0600500-01; -.
DR PaxDb; Q7XPT0; -.
DR PRIDE; Q7XPT0; -.
DR EnsemblPlants; Os04t0600500-01; Os04t0600500-01; Os04g0600500.
DR Gramene; Os04t0600500-01; Os04t0600500-01; Os04g0600500.
DR eggNOG; ENOG502QU4N; Eukaryota.
DR HOGENOM; CLU_033380_1_0_1; -.
DR Proteomes; UP000000763; Chromosome 4.
DR Proteomes; UP000059680; Chromosome 4.
DR Genevisible; Q7XPT0; OS.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR InterPro; IPR013591; Brevis_radix_dom.
DR InterPro; IPR044532; BRX-like.
DR InterPro; IPR027988; BRX_N.
DR PANTHER; PTHR46058; PTHR46058; 2.
DR Pfam; PF08381; BRX; 1.
DR Pfam; PF13713; BRX_N; 1.
DR PROSITE; PS51514; BRX; 1.
PE 3: Inferred from homology;
KW Nucleus; Reference proteome.
FT CHAIN 1..213
FT /note="Putative protein Brevis radix-like 3"
FT /id="PRO_0000373828"
FT DOMAIN 158..213
FT /note="BRX"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00847"
FT REGION 7..27
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 213 AA; 23533 MW; 4C41395D90C2AB1D CRC64;
MLACIACSSK EGGEDGSRGA ATPHGRDAVK SLTSQLKDMV LKFSGSNKHQ HYKAATAGSP
SFRSRSYRRP YPGFIDDSAF MTTTRPGGEA YMYTRAAPPP PVRAASTSMA TWDMTRSKSN
RGWQQDAGRS PGGTTWIQSI EEEAGADDVT VVEDAVPREW TAQVEPGVQI TFVTLPGGGN
DLKRIRFSRE RFGEDRAKVW WEHNRDRIQA QYL