BSD_COCIM
ID BSD_COCIM Reviewed; 137 AA.
AC P0CI02; A0A0E1RVF3; J3K1A6;
DT 05-OCT-2010, integrated into UniProtKB/Swiss-Prot.
DT 05-OCT-2010, sequence version 1.
DT 03-AUG-2022, entry version 50.
DE RecName: Full=Blasticidin-S deaminase;
DE EC=3.5.4.23;
GN ORFNames=CIMG_08654;
OS Coccidioides immitis (strain RS) (Valley fever fungus).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Onygenales; Onygenaceae; Coccidioides.
OX NCBI_TaxID=246410;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RS;
RX PubMed=19717792; DOI=10.1101/gr.087551.108;
RA Sharpton T.J., Stajich J.E., Rounsley S.D., Gardner M.J., Wortman J.R.,
RA Jordar V.S., Maiti R., Kodira C.D., Neafsey D.E., Zeng Q., Hung C.-Y.,
RA McMahan C., Muszewska A., Grynberg M., Mandel M.A., Kellner E.M.,
RA Barker B.M., Galgiani J.N., Orbach M.J., Kirkland T.N., Cole G.T.,
RA Henn M.R., Birren B.W., Taylor J.W.;
RT "Comparative genomic analyses of the human fungal pathogens Coccidioides
RT and their relatives.";
RL Genome Res. 19:1722-1731(2009).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=RS;
RX PubMed=20516208; DOI=10.1101/gr.103911.109;
RA Neafsey D.E., Barker B.M., Sharpton T.J., Stajich J.E., Park D.J.,
RA Whiston E., Hung C.-Y., McMahan C., White J., Sykes S., Heiman D.,
RA Young S., Zeng Q., Abouelleil A., Aftuck L., Bessette D., Brown A.,
RA FitzGerald M., Lui A., Macdonald J.P., Priest M., Orbach M.J.,
RA Galgiani J.N., Kirkland T.N., Cole G.T., Birren B.W., Henn M.R.,
RA Taylor J.W., Rounsley S.D.;
RT "Population genomic sequencing of Coccidioides fungi reveals recent
RT hybridization and transposon control.";
RL Genome Res. 20:938-946(2010).
RN [3]
RP X-RAY CRYSTALLOGRAPHY (1.7 ANGSTROMS) IN COMPLEX WITH ZINC IONS, COFACTOR,
RP AND SUBUNIT.
RG Seattle structural genomics center for infectious disease (SSGCID);
RT "Crystal structure of blasticidin S deaminase from Coccidioides immitis.";
RL Submitted (SEP-2010) to the PDB data bank.
CC -!- FUNCTION: Catalyzes the deamination of the cytosine moiety of the
CC antibiotics blasticidin S, cytomycin and acetylblasticidin S.
CC {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=blasticidin S + H(+) + H2O = deaminohydroxyblasticidin S +
CC NH4(+); Xref=Rhea:RHEA:10148, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378,
CC ChEBI:CHEBI:28938, ChEBI:CHEBI:57289, ChEBI:CHEBI:57697; EC=3.5.4.23;
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105; Evidence={ECO:0000269|Ref.3};
CC -!- SUBUNIT: Homotetramer. {ECO:0000269|Ref.3}.
CC -!- SIMILARITY: Belongs to the cytidine and deoxycytidylate deaminase
CC family. {ECO:0000305}.
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DR EMBL; GG704913; EAS29908.1; -; Genomic_DNA.
DR RefSeq; XP_001241491.1; XM_001241490.2.
DR PDB; 3OJ6; X-ray; 1.70 A; A/B/C/D=1-137.
DR PDBsum; 3OJ6; -.
DR AlphaFoldDB; P0CI02; -.
DR SMR; P0CI02; -.
DR EnsemblFungi; EAS29908; EAS29908; CIMG_08654.
DR GeneID; 4559970; -.
DR KEGG; cim:CIMG_08654; -.
DR VEuPathDB; FungiDB:CIMG_08654; -.
DR InParanoid; P0CI02; -.
DR OMA; RYRNDWQ; -.
DR OrthoDB; 1400471at2759; -.
DR Proteomes; UP000001261; Unassembled WGS sequence.
DR GO; GO:0047711; F:blasticidin-S deaminase activity; IEA:UniProtKB-EC.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:UniProt.
DR GO; GO:0046677; P:response to antibiotic; IEA:UniProtKB-KW.
DR InterPro; IPR016192; APOBEC/CMP_deaminase_Zn-bd.
DR InterPro; IPR002125; CMP_dCMP_dom.
DR InterPro; IPR016193; Cytidine_deaminase-like.
DR Pfam; PF00383; dCMP_cyt_deam_1; 1.
DR SUPFAM; SSF53927; SSF53927; 1.
DR PROSITE; PS00903; CYT_DCMP_DEAMINASES_1; 1.
DR PROSITE; PS51747; CYT_DCMP_DEAMINASES_2; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Antibiotic resistance; Hydrolase; Metal-binding;
KW Reference proteome; Zinc.
FT CHAIN 1..137
FT /note="Blasticidin-S deaminase"
FT /id="PRO_0000399822"
FT DOMAIN 1..131
FT /note="CMP/dCMP-type deaminase"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01083"
FT ACT_SITE 59
FT /note="Proton donor"
FT /evidence="ECO:0000250"
FT BINDING 31
FT /ligand="substrate"
FT /ligand_note="ligand shared between two homotetrameric
FT partners"
FT /note="in other chain"
FT /evidence="ECO:0000250"
FT BINDING 57
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_note="catalytic"
FT BINDING 85
FT /ligand="substrate"
FT /ligand_note="ligand shared between two homotetrameric
FT partners"
FT /note="in other chain"
FT /evidence="ECO:0000250"
FT BINDING 91
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_note="catalytic"
FT BINDING 94
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_note="catalytic"
FT BINDING 128
FT /ligand="substrate"
FT /ligand_note="ligand shared between two homotetrameric
FT partners"
FT /evidence="ECO:0000250"
FT BINDING 130
FT /ligand="substrate"
FT /ligand_note="ligand shared between two homotetrameric
FT partners"
FT /note="in other chain"
FT /evidence="ECO:0000250"
FT HELIX 8..22
FT /evidence="ECO:0007829|PDB:3OJ6"
FT STRAND 28..30
FT /evidence="ECO:0007829|PDB:3OJ6"
FT STRAND 32..38
FT /evidence="ECO:0007829|PDB:3OJ6"
FT STRAND 43..47
FT /evidence="ECO:0007829|PDB:3OJ6"
FT TURN 52..54
FT /evidence="ECO:0007829|PDB:3OJ6"
FT HELIX 58..68
FT /evidence="ECO:0007829|PDB:3OJ6"
FT STRAND 74..81
FT /evidence="ECO:0007829|PDB:3OJ6"
FT TURN 82..85
FT /evidence="ECO:0007829|PDB:3OJ6"
FT STRAND 86..88
FT /evidence="ECO:0007829|PDB:3OJ6"
FT HELIX 92..101
FT /evidence="ECO:0007829|PDB:3OJ6"
FT STRAND 106..109
FT /evidence="ECO:0007829|PDB:3OJ6"
FT STRAND 112..114
FT /evidence="ECO:0007829|PDB:3OJ6"
FT STRAND 116..119
FT /evidence="ECO:0007829|PDB:3OJ6"
FT HELIX 120..123
FT /evidence="ECO:0007829|PDB:3OJ6"
FT STRAND 124..126
FT /evidence="ECO:0007829|PDB:3OJ6"
SQ SEQUENCE 137 AA; 14217 MW; F23E4F13D06D8EA0 CRC64;
MAPEPLSAAG QNLIDTATSV INGIPVSDFY SVASAAISDD GRVFSGVNVY HFNGGPCAEL
VVLGVAAAAG ATKLTHIVAI ANEGRGILSP CGRCRQVLAD LHPGIKAIVI GKEGPKMVAV
EELLPSIYAW DKDYDRI