TIM50_CANAL
ID TIM50_CANAL Reviewed; 469 AA.
AC Q59W44; A0A1D8PF38;
DT 06-DEC-2005, integrated into UniProtKB/Swiss-Prot.
DT 26-APR-2005, sequence version 1.
DT 03-AUG-2022, entry version 92.
DE RecName: Full=Mitochondrial import inner membrane translocase subunit TIM50;
DE Flags: Precursor;
GN Name=TIM50; OrderedLocusNames=CAALFM_C111220CA;
GN ORFNames=CaO19.680, CaO19.8297;
OS Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida.
OX NCBI_TaxID=237561;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=15123810; DOI=10.1073/pnas.0401648101;
RA Jones T., Federspiel N.A., Chibana H., Dungan J., Kalman S., Magee B.B.,
RA Newport G., Thorstenson Y.R., Agabian N., Magee P.T., Davis R.W.,
RA Scherer S.;
RT "The diploid genome sequence of Candida albicans.";
RL Proc. Natl. Acad. Sci. U.S.A. 101:7329-7334(2004).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=17419877; DOI=10.1186/gb-2007-8-4-r52;
RA van het Hoog M., Rast T.J., Martchenko M., Grindle S., Dignard D.,
RA Hogues H., Cuomo C., Berriman M., Scherer S., Magee B.B., Whiteway M.,
RA Chibana H., Nantel A., Magee P.T.;
RT "Assembly of the Candida albicans genome into sixteen supercontigs aligned
RT on the eight chromosomes.";
RL Genome Biol. 8:RESEARCH52.1-RESEARCH52.12(2007).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND GENOME REANNOTATION.
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=24025428; DOI=10.1186/gb-2013-14-9-r97;
RA Muzzey D., Schwartz K., Weissman J.S., Sherlock G.;
RT "Assembly of a phased diploid Candida albicans genome facilitates allele-
RT specific measurements and provides a simple model for repeat and indel
RT structure.";
RL Genome Biol. 14:RESEARCH97.1-RESEARCH97.14(2013).
CC -!- FUNCTION: Essential component of the TIM23 complex, a complex that
CC mediates the translocation of transit peptide-containing proteins
CC across the mitochondrial inner membrane. Required to direct preproteins
CC in transit and direct them to the channel protein TIM23, and possibly
CC facilitates transfer of the translocating proteins from the TOM complex
CC to the TIM23 complex (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Component of the TIM23 complex, at least composed of TIM23,
CC TIM17, TIM50 and TIM21. Interacts with preproteins in transit (By
CC similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Mitochondrion inner membrane {ECO:0000250};
CC Single-pass membrane protein {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the TIM50 family. {ECO:0000305}.
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DR EMBL; CP017623; AOW26747.1; -; Genomic_DNA.
DR RefSeq; XP_713813.1; XM_708720.1.
DR AlphaFoldDB; Q59W44; -.
DR SMR; Q59W44; -.
DR STRING; 237561.Q59W44; -.
DR PRIDE; Q59W44; -.
DR GeneID; 3644530; -.
DR KEGG; cal:CAALFM_C111220CA; -.
DR CGD; CAL0000183476; TIM50.
DR VEuPathDB; FungiDB:C1_11220C_A; -.
DR eggNOG; KOG2832; Eukaryota.
DR HOGENOM; CLU_023309_1_2_1; -.
DR InParanoid; Q59W44; -.
DR OrthoDB; 1142452at2759; -.
DR PRO; PR:Q59W44; -.
DR Proteomes; UP000000559; Chromosome 1.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IDA:CGD.
DR GO; GO:0005744; C:TIM23 mitochondrial import inner membrane translocase complex; IBA:GO_Central.
DR GO; GO:0030150; P:protein import into mitochondrial matrix; IBA:GO_Central.
DR Gene3D; 3.40.50.1000; -; 1.
DR InterPro; IPR004274; FCP1_dom.
DR InterPro; IPR036412; HAD-like_sf.
DR InterPro; IPR023214; HAD_sf.
DR InterPro; IPR027111; Tim50.
DR PANTHER; PTHR12210:SF3; PTHR12210:SF3; 1.
DR Pfam; PF03031; NIF; 1.
DR SMART; SM00577; CPDc; 1.
DR SUPFAM; SSF56784; SSF56784; 1.
DR PROSITE; PS50969; FCP1; 1.
PE 3: Inferred from homology;
KW Membrane; Mitochondrion; Mitochondrion inner membrane; Protein transport;
KW Reference proteome; Transit peptide; Translocation; Transmembrane;
KW Transmembrane helix; Transport.
FT TRANSIT 1..16
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN 17..469
FT /note="Mitochondrial import inner membrane translocase
FT subunit TIM50"
FT /id="PRO_0000043127"
FT TOPO_DOM 17..108
FT /note="Mitochondrial matrix"
FT /evidence="ECO:0000255"
FT TRANSMEM 109..125
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 126..469
FT /note="Mitochondrial intermembrane"
FT /evidence="ECO:0000255"
FT DOMAIN 183..326
FT /note="FCP1 homology"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00336"
FT REGION 70..99
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 469 AA; 54241 MW; BE6AE66F1554C3BF CRC64;
MFRTQSRYLV RSILANHCVL PSTRMAVSPI LNQSIKFYSS KDNATDKSQE KEQPKSILND
DMLARAGFED VDPKEETSNS EEQATKQTGR KRKRAQTSKD LQRERYANMF YLSALIFGVA
GVGYMSRDWD SEKEQEEMDG KNVENGYTPK LMYERLSKRL GSLFTFFSEP AFENLLPPPP
PEQYRRPLTL VVTLDDFLIH SNWDTQHGWR TGKRPGLDYF LGYLSQYYEI VVFSSNSQIY
SDKTVNKLDP YHAYISYALF REACRYKDGK LIKDLSLLNR DLGKTVMIDV DEDSAALQPE
NSIIVKKWEG QPDEYLISLI PFLEYLATQP VKDVRPILNS YKDKSNIVAE FAERENKLRE
QWRKDHGGNN GKPNAGNFIA KLLGIPVPEP KMPLDIIREH GQLQYEHFQK YLQENAHKFL
EEEQKLKDEF GKVTLNKLIT EGAPNAEEIA KVQQQRALEE AQKQQEGHK