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BSH_MOUSE
ID   BSH_MOUSE               Reviewed;         232 AA.
AC   Q810B3; Q3SXB1;
DT   31-AUG-2004, integrated into UniProtKB/Swiss-Prot.
DT   01-JUN-2003, sequence version 1.
DT   03-AUG-2022, entry version 142.
DE   RecName: Full=Brain-specific homeobox protein homolog;
GN   Name=Bsx {ECO:0000312|EMBL:AAO84023.1};
OS   Mus musculus (Mouse).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC   Murinae; Mus; Mus.
OX   NCBI_TaxID=10090;
RN   [1] {ECO:0000312|EMBL:AAO84023.1}
RP   NUCLEOTIDE SEQUENCE [MRNA].
RC   STRAIN=CD-1 {ECO:0000312|EMBL:AAO84023.1};
RC   TISSUE=Hypothalamus {ECO:0000269|Ref.1}, and
RC   Pineal gland {ECO:0000269|Ref.1};
RA   Assimacopoulos S., Ragsdale C.W.;
RT   "Identification of vertebrate homologs of the Drosophila brain-specific
RT   homeobox gene.";
RL   Submitted (FEB-2003) to the EMBL/GenBank/DDBJ databases.
RN   [2]
RP   NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1 AND 2), FUNCTION, MUTAGENESIS OF
RP   ARG-109 AND ARG-111, AND SUBCELLULAR LOCATION.
RX   PubMed=17353277; DOI=10.1128/mcb.01561-06;
RA   Chu H.-Y., Ohtoshi A.;
RT   "Cloning and functional analysis of hypothalamic homeobox gene Bsx1a and
RT   its isoform, Bsx1b.";
RL   Mol. Cell. Biol. 27:3743-3749(2007).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
RX   PubMed=15489334; DOI=10.1101/gr.2596504;
RG   The MGC Project Team;
RT   "The status, quality, and expansion of the NIH full-length cDNA project:
RT   the Mammalian Gene Collection (MGC).";
RL   Genome Res. 14:2121-2127(2004).
RN   [4]
RP   TISSUE SPECIFICITY, AND DEVELOPMENTAL STAGE.
RX   PubMed=14678827; DOI=10.1016/s1567-133x(03)00151-0;
RA   Cremona M., Colombo E., Andreazzoli M., Cossu G., Broccoli V.;
RT   "Bsx, an evolutionary conserved brain specific homeobox gene expressed in
RT   the septum, epiphysis, mammillary bodies and arcuate nucleus.";
RL   Gene Expr. Patterns 4:47-51(2004).
RN   [5]
RP   FUNCTION.
RX   PubMed=17550780; DOI=10.1016/j.cmet.2007.05.007;
RA   Sakkou M., Wiedmer P., Anlag K., Hamm A., Seuntjens E., Ettwiller L.,
RA   Tschoep M.H., Treier M.;
RT   "A role for brain-specific homeobox factor bsx in the control of
RT   hyperphagia and locomotory behavior.";
RL   Cell Metab. 5:450-463(2007).
RN   [6]
RP   FUNCTION.
RX   PubMed=17485440; DOI=10.1128/mcb.00215-07;
RA   McArthur T., Ohtoshi A.;
RT   "A brain-specific homeobox gene, bsx, is essential for proper postnatal
RT   growth and nursing.";
RL   Mol. Cell. Biol. 27:5120-5127(2007).
CC   -!- FUNCTION: DNA binding protein that function as transcriptional
CC       activator. Is essential for normal postnatal growth and nursing. Is an
CC       essential factor for neuronal neuropeptide Y and agouti-related peptide
CC       function and locomotory behavior in the control of energy balance.
CC       {ECO:0000269|PubMed:17353277, ECO:0000269|PubMed:17485440,
CC       ECO:0000269|PubMed:17550780}.
CC   -!- SUBCELLULAR LOCATION: [Isoform 1]: Nucleus
CC       {ECO:0000269|PubMed:17353277}.
CC   -!- SUBCELLULAR LOCATION: [Isoform 2]: Cytoplasm
CC       {ECO:0000269|PubMed:17353277}.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=2;
CC       Name=1; Synonyms=Bsxla;
CC         IsoId=Q810B3-1; Sequence=Displayed;
CC       Name=2; Synonyms=Bsxlb;
CC         IsoId=Q810B3-2; Sequence=VSP_027570, VSP_027571;
CC   -!- TISSUE SPECIFICITY: Expressed in brain. In brain, it is restricted to a
CC       few specific developing brain structures such as pineal gland,
CC       telencephalic septum, hypothalamic pre-mammillary body and arcuate
CC       nucleus. {ECO:0000269|PubMed:14678827}.
CC   -!- DEVELOPMENTAL STAGE: Expressed in early embryonic stages of epiphysis
CC       development from 9.5 dpc onwards. {ECO:0000269|PubMed:14678827}.
CC   -!- SIMILARITY: Belongs to the distal-less homeobox family. {ECO:0000255}.
CC   -!- WEB RESOURCE: Name=Protein Spotlight; Note=Of fidgets and food - Issue
CC       85 of August 2007;
CC       URL="https://web.expasy.org/spotlight/back_issues/085";
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DR   EMBL; AY233396; AAO84023.1; -; mRNA.
DR   EMBL; BC104386; AAI04387.1; -; mRNA.
DR   EMBL; BC104387; AAI04388.1; -; mRNA.
DR   CCDS; CCDS23084.1; -. [Q810B3-1]
DR   RefSeq; NP_839976.1; NM_178245.3. [Q810B3-1]
DR   AlphaFoldDB; Q810B3; -.
DR   SMR; Q810B3; -.
DR   BioGRID; 232691; 2.
DR   STRING; 10090.ENSMUSP00000068057; -.
DR   PhosphoSitePlus; Q810B3; -.
DR   PaxDb; Q810B3; -.
DR   PRIDE; Q810B3; -.
DR   Antibodypedia; 9208; 105 antibodies from 19 providers.
DR   DNASU; 244813; -.
DR   Ensembl; ENSMUST00000067375; ENSMUSP00000068057; ENSMUSG00000054360. [Q810B3-1]
DR   GeneID; 244813; -.
DR   KEGG; mmu:244813; -.
DR   UCSC; uc009paa.1; mouse. [Q810B3-1]
DR   CTD; 390259; -.
DR   MGI; MGI:2669849; Bsx.
DR   VEuPathDB; HostDB:ENSMUSG00000054360; -.
DR   eggNOG; KOG0491; Eukaryota.
DR   GeneTree; ENSGT00940000161473; -.
DR   HOGENOM; CLU_104234_0_0_1; -.
DR   InParanoid; Q810B3; -.
DR   OMA; DLPGKHC; -.
DR   OrthoDB; 1572711at2759; -.
DR   PhylomeDB; Q810B3; -.
DR   TreeFam; TF350735; -.
DR   BioGRID-ORCS; 244813; 4 hits in 73 CRISPR screens.
DR   PRO; PR:Q810B3; -.
DR   Proteomes; UP000000589; Chromosome 9.
DR   RNAct; Q810B3; protein.
DR   Bgee; ENSMUSG00000054360; Expressed in ureteric bud trunk and 16 other tissues.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0005634; C:nucleus; IDA:MGI.
DR   GO; GO:0005667; C:transcription regulator complex; IDA:MGI.
DR   GO; GO:0001228; F:DNA-binding transcription activator activity, RNA polymerase II-specific; IDA:NTNU_SB.
DR   GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR   GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IDA:NTNU_SB.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IDA:MGI.
DR   GO; GO:1990837; F:sequence-specific double-stranded DNA binding; ISO:MGI.
DR   GO; GO:0007420; P:brain development; ISS:UniProtKB.
DR   GO; GO:0042755; P:eating behavior; IMP:MGI.
DR   GO; GO:0007626; P:locomotory behavior; IMP:MGI.
DR   GO; GO:0060056; P:mammary gland involution; IMP:MGI.
DR   GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IDA:NTNU_SB.
DR   GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR   CDD; cd00086; homeodomain; 1.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR017970; Homeobox_CS.
DR   InterPro; IPR001356; Homeobox_dom.
DR   InterPro; IPR020479; Homeobox_metazoa.
DR   Pfam; PF00046; Homeodomain; 1.
DR   PRINTS; PR00024; HOMEOBOX.
DR   SMART; SM00389; HOX; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   PROSITE; PS00027; HOMEOBOX_1; 1.
DR   PROSITE; PS50071; HOMEOBOX_2; 1.
PE   1: Evidence at protein level;
KW   Activator; Alternative splicing; Cytoplasm; DNA-binding; Homeobox; Nucleus;
KW   Reference proteome; Transcription; Transcription regulation.
FT   CHAIN           1..232
FT                   /note="Brain-specific homeobox protein homolog"
FT                   /id="PRO_0000048844"
FT   DNA_BIND        108..168
FT                   /note="Homeobox"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00108"
FT   REGION          160..232
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   VAR_SEQ         88..131
FT                   /note="GMPVPALFPHPQHAELPGKHCRRRKARTVFSDSQLSGLEKRFEI -> ALRP
FT                   GEKVRNPALPVDARACGAHCPQPLRDSGENVVPEPADEA (in isoform 2)"
FT                   /evidence="ECO:0000303|PubMed:17353277"
FT                   /id="VSP_027570"
FT   VAR_SEQ         132..232
FT                   /note="Missing (in isoform 2)"
FT                   /evidence="ECO:0000303|PubMed:17353277"
FT                   /id="VSP_027571"
FT   MUTAGEN         109
FT                   /note="R->G: Abolishes the nuclear localization; when
FT                   associated with G-101."
FT                   /evidence="ECO:0000269|PubMed:17353277"
FT   MUTAGEN         111
FT                   /note="R->G: Abolishes the nuclear localization; when
FT                   associated with G-109."
FT                   /evidence="ECO:0000269|PubMed:17353277"
SQ   SEQUENCE   232 AA;  25862 MW;  FEE7C9F1574F5624 CRC64;
     MNLNFTSPLH PASSQRPTSF FIEDILLHKP KPLREVAPDH FASSLASRVP LLDYGYPLMP
     TPTLLTPHAH HPLHKGDHHH PYFLTTSGMP VPALFPHPQH AELPGKHCRR RKARTVFSDS
     QLSGLEKRFE IQRYLSTPER VELATALSLS ETQVKTWFQN RRMKHKKQLR KSQDEPKAAD
     GPESPEGSPR APEGAPADAR LSLPAGAFVL TEPEDEVDIG DEGELSSGPH VL
 
 
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