TIPA_STRLI
ID TIPA_STRLI Reviewed; 253 AA.
AC P0A4T9; P32184;
DT 15-MAR-2005, integrated into UniProtKB/Swiss-Prot.
DT 15-MAR-2005, sequence version 1.
DT 25-MAY-2022, entry version 79.
DE RecName: Full=HTH-type transcriptional activator TipA;
GN Name=tipA;
OS Streptomyces lividans.
OC Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae;
OC Streptomyces.
OX NCBI_TaxID=1916;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=2537819; DOI=10.1128/jb.171.3.1459-1466.1989;
RA Murakami T., Holt T.G., Thompson C.J.;
RT "Thiostrepton-induced gene expression in Streptomyces lividans.";
RL J. Bacteriol. 171:1459-1466(1989).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], PARTIAL PROTEIN SEQUENCE, AND
RP CHARACTERIZATION.
RX PubMed=7688297; DOI=10.1002/j.1460-2075.1993.tb05987.x;
RA Holmes D.J., Caso J.L., Thompson C.J.;
RT "Autogenous transcriptional activation of a thiostrepton-induced gene in
RT Streptomyces lividans.";
RL EMBO J. 12:3183-3191(1993).
CC -!- FUNCTION: Transcriptional activator. Is activated when bound to the
CC antibiotic thiostrepton.
CC -!- SUBUNIT: Homodimer. {ECO:0000305}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative initiation; Named isoforms=2;
CC Name=Long; Synonyms=TipA-L;
CC IsoId=P0A4T9-1; Sequence=Displayed;
CC Name=Short; Synonyms=TipA-S;
CC IsoId=P0A4T9-2; Sequence=VSP_018752;
CC -!- SEQUENCE CAUTION:
CC Sequence=AAC13653.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; S64314; AAB27737.1; -; Genomic_DNA.
DR EMBL; M24524; AAC13653.1; ALT_INIT; Genomic_DNA.
DR PIR; S35354; S35354.
DR PDB; 1NY9; NMR; -; A=111-253.
DR PDB; 2MBZ; NMR; -; A=110-253.
DR PDB; 2MC0; NMR; -; A=110-253.
DR PDB; 2VZ4; X-ray; 2.90 A; A=2-109.
DR PDBsum; 1NY9; -.
DR PDBsum; 2MBZ; -.
DR PDBsum; 2MC0; -.
DR PDBsum; 2VZ4; -.
DR AlphaFoldDB; P0A4T9; -.
DR BMRB; P0A4T9; -.
DR SMR; P0A4T9; -.
DR EvolutionaryTrace; P0A4T9; -.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR DisProt; DP00997; -.
DR Gene3D; 1.10.490.50; -; 1.
DR InterPro; IPR009061; DNA-bd_dom_put_sf.
DR InterPro; IPR000551; MerR-type_HTH_dom.
DR InterPro; IPR036244; TipA-like_antibiotic-bd.
DR InterPro; IPR012925; TipAS_dom.
DR Pfam; PF13411; MerR_1; 1.
DR Pfam; PF07739; TipAS; 1.
DR PRINTS; PR00040; HTHMERR.
DR SMART; SM00422; HTH_MERR; 1.
DR SUPFAM; SSF46955; SSF46955; 1.
DR SUPFAM; SSF89082; SSF89082; 1.
DR PROSITE; PS00552; HTH_MERR_1; 1.
DR PROSITE; PS50937; HTH_MERR_2; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Activator; Alternative initiation; Direct protein sequencing;
KW DNA-binding; Transcription; Transcription regulation.
FT CHAIN 1..253
FT /note="HTH-type transcriptional activator TipA"
FT /id="PRO_0000013606"
FT DOMAIN 1..71
FT /note="HTH merR-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00254"
FT DNA_BIND 5..24
FT /note="H-T-H motif"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00254"
FT VAR_SEQ 1..109
FT /note="Missing (in isoform Short)"
FT /evidence="ECO:0000305"
FT /id="VSP_018752"
FT HELIX 5..12
FT /evidence="ECO:0007829|PDB:2VZ4"
FT HELIX 16..24
FT /evidence="ECO:0007829|PDB:2VZ4"
FT STRAND 31..33
FT /evidence="ECO:0007829|PDB:2VZ4"
FT STRAND 39..41
FT /evidence="ECO:0007829|PDB:2VZ4"
FT HELIX 43..57
FT /evidence="ECO:0007829|PDB:2VZ4"
FT HELIX 62..69
FT /evidence="ECO:0007829|PDB:2VZ4"
FT HELIX 79..105
FT /evidence="ECO:0007829|PDB:2VZ4"
FT HELIX 116..123
FT /evidence="ECO:0007829|PDB:2MBZ"
FT HELIX 129..131
FT /evidence="ECO:0007829|PDB:2MBZ"
FT HELIX 132..138
FT /evidence="ECO:0007829|PDB:2MBZ"
FT HELIX 144..152
FT /evidence="ECO:0007829|PDB:2MBZ"
FT HELIX 165..180
FT /evidence="ECO:0007829|PDB:1NY9"
FT HELIX 187..203
FT /evidence="ECO:0007829|PDB:1NY9"
FT HELIX 209..218
FT /evidence="ECO:0007829|PDB:1NY9"
FT HELIX 223..229
FT /evidence="ECO:0007829|PDB:1NY9"
FT HELIX 230..232
FT /evidence="ECO:0007829|PDB:1NY9"
FT STRAND 233..235
FT /evidence="ECO:0007829|PDB:2MC0"
FT HELIX 236..251
FT /evidence="ECO:0007829|PDB:1NY9"
SQ SEQUENCE 253 AA; 28711 MW; 0B32F6191BF2B779 CRC64;
MSYSVGQVAG FAGVTVRTLH HYDDIGLLVP SERSHAGHRR YSDADLDRLQ QILFYRELGF
PLDEVAALLD DPAADPRAHL RRQHELLSAR IGKLQKMAAA VEQAMEARSM GINLTPEEKF
EVFGDFDPDQ YEEEVRERWG NTDAYRQSKE KTASYTKEDW QRIQDEADEL TRRFVALMDA
GEPADSEGAM DAAEDHRQGI ARNHYDCGYE MHTCLGEMYV SDERFTRNID AAKPGLAAYM
RDAILANAVR HTP