TIPIN_DANRE
ID TIPIN_DANRE Reviewed; 294 AA.
AC Q6DBR4;
DT 02-OCT-2007, integrated into UniProtKB/Swiss-Prot.
DT 16-AUG-2004, sequence version 1.
DT 03-AUG-2022, entry version 85.
DE RecName: Full=TIMELESS-interacting protein;
GN Name=tipin; ORFNames=zgc:91928;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo;
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Plays an important role in the control of DNA replication and
CC the maintenance of replication fork stability. Important for cell
CC survival after DNA damage or replication stress. May be required fin
CC the replication checkpoint induced by hydroxyurea or ultraviolet light
CC (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Interacts with TIMELESS, which impairs TIMELESS self-
CC association. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}. Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the CSM3 family. {ECO:0000305}.
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DR EMBL; BC078398; AAH78398.1; -; mRNA.
DR RefSeq; NP_001003452.2; NM_001003452.2.
DR AlphaFoldDB; Q6DBR4; -.
DR SMR; Q6DBR4; -.
DR STRING; 7955.ENSDARP00000052473; -.
DR PaxDb; Q6DBR4; -.
DR Ensembl; ENSDART00000189930; ENSDARP00000147017; ENSDARG00000110772.
DR GeneID; 445058; -.
DR KEGG; dre:445058; -.
DR CTD; 54962; -.
DR ZFIN; ZDB-GENE-040801-189; tipin.
DR eggNOG; KOG3004; Eukaryota.
DR InParanoid; Q6DBR4; -.
DR OrthoDB; 1505397at2759; -.
DR PhylomeDB; Q6DBR4; -.
DR PRO; PR:Q6DBR4; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Unplaced.
DR Bgee; ENSDARG00000110772; Expressed in superior colliculus and 10 other tissues.
DR GO; GO:0000785; C:chromatin; ISS:UniProtKB.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; ISS:UniProtKB.
DR GO; GO:0031298; C:replication fork protection complex; IBA:GO_Central.
DR GO; GO:0003677; F:DNA binding; IBA:GO_Central.
DR GO; GO:0044770; P:cell cycle phase transition; ISS:BHF-UCL.
DR GO; GO:0051301; P:cell division; IEA:UniProtKB-KW.
DR GO; GO:0000076; P:DNA replication checkpoint signaling; ISS:UniProtKB.
DR GO; GO:0031573; P:mitotic intra-S DNA damage checkpoint signaling; ISS:UniProtKB.
DR GO; GO:0008284; P:positive regulation of cell population proliferation; ISS:UniProtKB.
DR GO; GO:0043111; P:replication fork arrest; IBA:GO_Central.
DR GO; GO:0048478; P:replication fork protection; IBA:GO_Central.
DR InterPro; IPR012923; Csm3.
DR InterPro; IPR040038; TIPIN/Csm3/Swi3.
DR PANTHER; PTHR13220; PTHR13220; 1.
DR Pfam; PF07962; Swi3; 1.
PE 2: Evidence at transcript level;
KW Cell cycle; Cell division; Cytoplasm; DNA damage; Mitosis; Nucleus;
KW Reference proteome.
FT CHAIN 1..294
FT /note="TIMELESS-interacting protein"
FT /id="PRO_0000305257"
FT REGION 20..54
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 74..150
FT /note="Interaction with TIMELESS"
FT /evidence="ECO:0000250"
FT REGION 168..203
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 218..294
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 222..263
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 294 AA; 33181 MW; F2C4090C394DCC89 CRC64;
MIDPLENGLF DIPDYEQIED ETFPPLPPPL SPGRAELEDD LFGNAEGEEE GEVSKLAEVP
VAKRRTVKRP RPKLDANRLI SEKGLPALRT LFEDVKFKGK GHETENLKLL MLKMENWAHR
LYPKMQFEEF IDKVENLGGK KEVQTCLKRI RLDMPITHED YVAEEAEIQV PEESVPSGDG
GFPEDPFIHS TPAPASLTEE QQQRIELNKR LALERRLAKQ KQLESTPISI QEDADEPSTS
SSGQFLSEEN PKTTSNQTPL KHKPAELQES PLHDNESSSH IANGIIDDDD DDDD