TL15B_ARATH
ID TL15B_ARATH Reviewed; 223 AA.
AC Q9LVV5; Q94AF5;
DT 29-MAY-2007, integrated into UniProtKB/Swiss-Prot.
DT 29-MAY-2007, sequence version 2.
DT 25-MAY-2022, entry version 93.
DE RecName: Full=Thylakoid lumenal 15.0 kDa protein 2, chloroplastic;
DE Flags: Precursor;
GN OrderedLocusNames=At5g52970; ORFNames=MNB8_3;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1] {ECO:0000312|EMBL:BAA97137.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia {ECO:0000269|PubMed:10718197};
RX PubMed=10718197; DOI=10.1093/dnares/7.1.31;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence
RT features of the regions of 3,076,755 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:31-63(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3] {ECO:0000305, ECO:0000312|EMBL:AAK82479.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia {ECO:0000269|PubMed:14593172};
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4] {ECO:0000305}
RP PROTEIN SEQUENCE OF 76-95, AND SUBCELLULAR LOCATION.
RC STRAIN=cv. Columbia {ECO:0000269|PubMed:11719511};
RX PubMed=11719511; DOI=10.1074/jbc.m108575200;
RA Schubert M., Petersson U.A., Haas B.J., Funk C., Schroeder W.P.,
RA Kieselbach T.;
RT "Proteome map of the chloroplast lumen of Arabidopsis thaliana.";
RL J. Biol. Chem. 277:8354-8365(2002).
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast thylakoid lumen
CC {ECO:0000269|PubMed:11719511}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAA97137.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB018116; BAA97137.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED96284.1; -; Genomic_DNA.
DR EMBL; CP002688; ANM68272.1; -; Genomic_DNA.
DR EMBL; AY048216; AAK82479.1; -; mRNA.
DR EMBL; AY091710; AAM10309.1; -; mRNA.
DR RefSeq; NP_001318791.1; NM_001345017.1.
DR RefSeq; NP_568781.1; NM_124675.3.
DR AlphaFoldDB; Q9LVV5; -.
DR SMR; Q9LVV5; -.
DR BioGRID; 20620; 1.
DR IntAct; Q9LVV5; 1.
DR STRING; 3702.AT5G52970.1; -.
DR PaxDb; Q9LVV5; -.
DR PRIDE; Q9LVV5; -.
DR ProteomicsDB; 234318; -.
DR EnsemblPlants; AT5G52970.1; AT5G52970.1; AT5G52970.
DR EnsemblPlants; AT5G52970.2; AT5G52970.2; AT5G52970.
DR GeneID; 835375; -.
DR Gramene; AT5G52970.1; AT5G52970.1; AT5G52970.
DR Gramene; AT5G52970.2; AT5G52970.2; AT5G52970.
DR KEGG; ath:AT5G52970; -.
DR Araport; AT5G52970; -.
DR TAIR; locus:2168362; AT5G52970.
DR eggNOG; ENOG502QVHQ; Eukaryota.
DR HOGENOM; CLU_090456_0_0_1; -.
DR InParanoid; Q9LVV5; -.
DR OMA; NNCAEVK; -.
DR OrthoDB; 1566022at2759; -.
DR PhylomeDB; Q9LVV5; -.
DR PRO; PR:Q9LVV5; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9LVV5; baseline and differential.
DR Genevisible; Q9LVV5; AT.
DR GO; GO:0009507; C:chloroplast; HDA:TAIR.
DR GO; GO:0009543; C:chloroplast thylakoid lumen; IEA:UniProtKB-SubCell.
DR GO; GO:0009579; C:thylakoid; HDA:TAIR.
DR GO; GO:0031977; C:thylakoid lumen; HDA:TAIR.
PE 1: Evidence at protein level;
KW Chloroplast; Direct protein sequencing; Plastid; Reference proteome;
KW Thylakoid; Transit peptide.
FT TRANSIT 1..?
FT /note="Chloroplast"
FT /evidence="ECO:0000255, ECO:0000303|PubMed:11719511"
FT TRANSIT ?..75
FT /note="Thylakoid"
FT /evidence="ECO:0000269|PubMed:11719511"
FT CHAIN 76..223
FT /note="Thylakoid lumenal 15.0 kDa protein 2, chloroplastic"
FT /id="PRO_0000287917"
SQ SEQUENCE 223 AA; 24569 MW; BBD922039FA5CA28 CRC64;
MAMLFRPPPS QCRSFSPFVF NYSSREVSSS SRLSLKTSGD EENWVSRFRS KSLSLVFSGA
LALGLSLSGV GFADAKVGVN KPELLPKEFT SVIDVADFLS NGQEKRIAQE IANLEKDTGF
KLRVLAQNYP VTPGLAIKDF WQVDDSTIVF VADPTFGNIL NFNVGATVDL DIPRSFWSRL
AGKYGNMFYW KEKGEDASIE AAVMAISSCL REPVGRNNCA EIQ