TL19_ARATH
ID TL19_ARATH Reviewed; 229 AA.
AC P82658; E0X9N3; F4J2A4; Q0WLK8;
DT 26-SEP-2001, integrated into UniProtKB/Swiss-Prot.
DT 07-MAR-2006, sequence version 2.
DT 25-MAY-2022, entry version 97.
DE RecName: Full=Thylakoid lumenal 19 kDa protein, chloroplastic;
DE AltName: Full=P19;
DE Flags: Precursor;
GN OrderedLocusNames=At3g63540; ORFNames=TEL3S;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=cv. Columbia, and cv. Wassilewskija;
RX PubMed=20652368; DOI=10.1007/s11103-010-9664-x;
RA Wang C.T., Ho C.H., Hseu M.J., Chen C.M.;
RT "The subtelomeric region of the Arabidopsis thaliana chromosome IIIR
RT contains potential genes and duplicated fragments from other chromosomes.";
RL Plant Mol. Biol. 74:155-166(2010).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA] OF 92-229.
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [3]
RP GENOME REANNOTATION, AND SEQUENCE REVISION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP PROTEIN SEQUENCE OF 53-73, AND SUBCELLULAR LOCATION.
RC STRAIN=cv. Columbia;
RX PubMed=11719511; DOI=10.1074/jbc.m108575200;
RA Schubert M., Petersson U.A., Haas B.J., Funk C., Schroeder W.P.,
RA Kieselbach T.;
RT "Proteome map of the chloroplast lumen of Arabidopsis thaliana.";
RL J. Biol. Chem. 277:8354-8365(2002).
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast thylakoid lumen
CC {ECO:0000269|PubMed:11719511}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AEE80501.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; GQ903575; ADM35939.1; -; Genomic_DNA.
DR EMBL; GQ903576; ADM35940.1; -; Genomic_DNA.
DR EMBL; AL732522; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CP002686; AEE80501.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AK230190; BAF01999.1; -; mRNA.
DR RefSeq; NP_001190172.1; NM_001203243.2.
DR AlphaFoldDB; P82658; -.
DR IntAct; P82658; 1.
DR STRING; 3702.AT3G63540.1; -.
DR PaxDb; P82658; -.
DR PeptideAtlas; P82658; -.
DR PRIDE; P82658; -.
DR ProteomicsDB; 246447; -.
DR GeneID; 7922413; -.
DR KEGG; ath:AT3G63540; -.
DR Araport; AT3G63540; -.
DR eggNOG; ENOG502QUTY; Eukaryota.
DR HOGENOM; CLU_1708934_0_0_1; -.
DR InParanoid; P82658; -.
DR OrthoDB; 1256984at2759; -.
DR PRO; PR:P82658; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; P82658; baseline and differential.
DR GO; GO:0009543; C:chloroplast thylakoid lumen; IEA:UniProtKB-SubCell.
DR GO; GO:0019898; C:extrinsic component of membrane; IEA:InterPro.
DR GO; GO:0009654; C:photosystem II oxygen evolving complex; IEA:InterPro.
DR GO; GO:0005509; F:calcium ion binding; IEA:InterPro.
DR GO; GO:0015979; P:photosynthesis; IEA:InterPro.
DR InterPro; IPR016123; Mog1/PsbP_a/b/a-sand.
DR InterPro; IPR002683; PsbP_C.
DR Pfam; PF01789; PsbP; 1.
DR SUPFAM; SSF55724; SSF55724; 1.
PE 1: Evidence at protein level;
KW Chloroplast; Direct protein sequencing; Plastid; Reference proteome;
KW Thylakoid; Transit peptide.
FT TRANSIT 1..?
FT /note="Chloroplast"
FT /evidence="ECO:0000255"
FT TRANSIT ?..52
FT /note="Thylakoid"
FT /evidence="ECO:0000269|PubMed:11719511"
FT CHAIN 53..229
FT /note="Thylakoid lumenal 19 kDa protein, chloroplastic"
FT /id="PRO_0000072557"
FT CONFLICT 196
FT /note="R -> K (in Ref. 3; AEE80501 and 4; BAF01999)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 229 AA; 24979 MW; 51777DD744FE09D5 CRC64;
MATKIFLASP VISATRTPIV PKAIASRLGT SLAAALAATS VLTMVPVLPA AGEGNQTYKI
YYGTAASAAN YGGYGGNSDR KTSAEYVYDV PEGWKERLVS KVEKGTNGTD SEFYNPKKKT
EKEYLTFLAG FRQLAPRDVI LNNLALSDVE LQDLIAGADK VVSEERKDET GQVYYLYEID
GVGKHSLITV TCSKNRLYAH FVNAPAPEWN RDHDTLTHLR DSFKTVSSS
