ID   TLP4_ARATH              Reviewed;         265 AA.
AC   O80699; F4HX24;
DT   23-JAN-2007, integrated into UniProtKB/Swiss-Prot.
DT   01-NOV-1998, sequence version 1.
DT   03-AUG-2022, entry version 101.
DE   RecName: Full=Putative Tubby-like protein 4;
DE            Short=AtTLP4;
GN   Name=TULP4; OrderedLocusNames=At1g61940; ORFNames=F8K4.13;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11130712; DOI=10.1038/35048500;
RA   Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA   Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA   Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA   Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA   Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA   Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA   Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA   Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA   Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA   Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA   Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA   Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA   Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA   Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA   Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT   "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL   Nature 408:816-820(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   GENE FAMILY, AND NOMENCLATURE.
RX   PubMed=15064372; DOI=10.1104/pp.103.037820;
RA   Lai C.-P., Lee C.-L., Chen P.-H., Wu S.-H., Yang C.-C., Shaw J.-F.;
RT   "Molecular analyses of the Arabidopsis TUBBY-like protein gene family.";
RL   Plant Physiol. 134:1586-1597(2004).
CC   -!- SIMILARITY: Belongs to the TUB family. {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AEE33905.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR   EMBL; AC004392; AAC28518.1; -; Genomic_DNA.
DR   EMBL; CP002684; AEE33905.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; CP002684; ANM58625.1; -; Genomic_DNA.
DR   PIR; T02138; T02138.
DR   RefSeq; NP_001321047.1; NM_001334008.1.
DR   RefSeq; NP_176385.2; NM_104874.3.
DR   AlphaFoldDB; O80699; -.
DR   PRIDE; O80699; -.
DR   EnsemblPlants; AT1G61940.2; AT1G61940.2; AT1G61940.
DR   GeneID; 842489; -.
DR   Gramene; AT1G61940.2; AT1G61940.2; AT1G61940.
DR   KEGG; ath:AT1G61940; -.
DR   Araport; AT1G61940; -.
DR   TAIR; locus:2036773; AT1G61940.
DR   InParanoid; O80699; -.
DR   OrthoDB; 1445357at2759; -.
DR   PRO; PR:O80699; -.
DR   Proteomes; UP000006548; Chromosome 1.
DR   ExpressionAtlas; O80699; baseline and differential.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; TAS:TAIR.
DR   Gene3D; 3.20.90.10; -; 1.
DR   InterPro; IPR001810; F-box_dom.
DR   InterPro; IPR025659; Tubby-like_C.
DR   InterPro; IPR000007; Tubby_C.
DR   Pfam; PF00646; F-box; 1.
DR   Pfam; PF01167; Tub; 2.
DR   SUPFAM; SSF54518; SSF54518; 1.
PE   3: Inferred from homology;
KW   Reference proteome.
FT   CHAIN           1..265
FT                   /note="Putative Tubby-like protein 4"
FT                   /id="PRO_0000272232"
FT   DOMAIN          1..44
FT                   /note="F-box"
FT   DOMAIN          228..250
FT                   /note="FBD"
SQ   SEQUENCE   265 AA;  30184 MW;  146BB1296C391066 CRC64;
     MPPELLRDVL MRIERSEDTW PSRKNVVSCV GVCKNWRQIF KEIVNVPEVS SKFTFPISLK
     QPGPGGSLVQ CYVKRNRSNQ TFYLYLGGEA KIFCQSEPSE PNKSIWKLSL KPGGTATTQT
     ELDNFVSFRS PSGQKEGVLV LKSKVPRLEE QSWCLDFNGW RDIVSSGKKF QLVALLRTNL
     RMKTTFSSLR KSETCTNSSY EAEWIPLVRT SVFAVIARVC RDKKHTPSYE LKLALYFAKN
     SAILKKFVLR GYTREEDLLA LPVAN