ID   TLP4_ORYSJ              Reviewed;         419 AA.
AC   Q6ETL2;
DT   23-SEP-2008, integrated into UniProtKB/Swiss-Prot.
DT   23-SEP-2008, sequence version 2.
DT   03-AUG-2022, entry version 74.
DE   RecName: Full=Tubby-like protein 4;
DE            Short=OsTLP4;
DE   AltName: Full=Tubby-like F-box protein 13;
DE            Short=OsTLP13;
GN   Name=TULP4; Synonyms=TULP13;
GN   OrderedLocusNames=Os02g0179400, LOC_Os02g08310; ORFNames=P0544B02.22;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [3]
RP   GENE FAMILY, AND NOMENCLATURE.
RX   PubMed=18070109; DOI=10.1111/j.1742-4658.2007.06186.x;
RA   Liu Q.;
RT   "Identification of rice TUBBY-like genes and their evolution.";
RL   FEBS J. 275:163-171(2008).
RN   [4]
RP   GENE FAMILY, AND NOMENCLATURE.
RX   PubMed=18620041; DOI=10.1016/j.ygeno.2008.06.001;
RA   Yang Z., Zhou Y., Wang X., Gu S., Yu J., Liang G., Yan C., Xu C.;
RT   "Genomewide comparative phylogenetic and molecular evolutionary analysis of
RT   tubby-like protein family in Arabidopsis, rice, and poplar.";
RL   Genomics 92:246-253(2008).
CC   -!- SIMILARITY: Belongs to the TUB family. {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=BAD28008.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR   EMBL; AP004840; BAD28008.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; AP014958; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   RefSeq; XP_015622747.1; XM_015767261.1.
DR   AlphaFoldDB; Q6ETL2; -.
DR   SMR; Q6ETL2; -.
DR   STRING; 4530.OS02T0179400-00; -.
DR   PaxDb; Q6ETL2; -.
DR   PRIDE; Q6ETL2; -.
DR   GeneID; 107276884; -.
DR   KEGG; osa:107276884; -.
DR   eggNOG; KOG2502; Eukaryota.
DR   InParanoid; Q6ETL2; -.
DR   OrthoDB; 1445357at2759; -.
DR   Proteomes; UP000000763; Chromosome 2.
DR   Proteomes; UP000059680; Chromosome 2.
DR   Gene3D; 3.20.90.10; -; 1.
DR   InterPro; IPR025659; Tubby-like_C.
DR   InterPro; IPR000007; Tubby_C.
DR   Pfam; PF01167; Tub; 1.
DR   PRINTS; PR01573; SUPERTUBBY.
DR   SUPFAM; SSF54518; SSF54518; 1.
PE   3: Inferred from homology;
KW   Reference proteome.
FT   CHAIN           1..419
FT                   /note="Tubby-like protein 4"
FT                   /id="PRO_0000351123"
FT   REGION          1..96
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        31..55
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   419 AA;  46078 MW;  204051F857D55FC4 CRC64;
     MAATKREPLR PISSNAGTVE RRARGGAAAA AAAKEKEKEN EVPTEIGRGK DGGEKKPPVV
     VAVVVPPAPP LKPSSLQVRM KAEEEKEREE EEEGSSPAVA LVAGLQVRMG PRGRELLLPP
     PPPPPPLPLP TSSSYEAWDL SDNEAAPASS WATLPNRALL CRPLPLDVGR CTCIIAKETL
     AAAAAGARGV ALYSLYTNEG QGRQDRKLAV ARHRRRRGRS EFVVAQNLDG IFCTSDKNFL
     GTLSSNLVGS RYRIWGQGNR VDEIKSQSKR LLGVVAFAPT VTTLTGSFRS MRAWIPKNQS
     IHLKNSNSAQ IQHISGLPKD WQEKKIKADQ LCSRSPFYNN MTKRYELDFR ERAGRMGYKV
     QPSVKNFQMT LEEKGRQTIL QLGRIGKSKY IMDFRYPLTG YQALCICLAS IDSKLCCTL