ID   TLP5_ORYSJ              Reviewed;         428 AA.
AC   Q6Z2G9; A0A0P0VNM9; B7EA45;
DT   23-SEP-2008, integrated into UniProtKB/Swiss-Prot.
DT   05-JUL-2004, sequence version 1.
DT   03-AUG-2022, entry version 100.
DE   RecName: Full=Tubby-like F-box protein 5;
DE            Short=OsTLP5;
DE   AltName: Full=Tubby-like F-box protein 8;
DE            Short=OsTLP8;
GN   Name=TULP5; Synonyms=TULP8; OrderedLocusNames=Os02g0705300, LOC_Os02g47640;
GN   ORFNames=OsJ_007813, P0680A05.6-1;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA   Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA   Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA   Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA   Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA   Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA   Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA   Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA   Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA   Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA   Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA   Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA   Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA   Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA   McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT   "The genomes of Oryza sativa: a history of duplications.";
RL   PLoS Biol. 3:266-281(2005).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12869764; DOI=10.1126/science.1081288;
RG   The rice full-length cDNA consortium;
RT   "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT   japonica rice.";
RL   Science 301:376-379(2003).
RN   [6]
RP   GENE FAMILY, AND NOMENCLATURE.
RX   PubMed=18070109; DOI=10.1111/j.1742-4658.2007.06186.x;
RA   Liu Q.;
RT   "Identification of rice TUBBY-like genes and their evolution.";
RL   FEBS J. 275:163-171(2008).
RN   [7]
RP   TISSUE SPECIFICITY, GENE FAMILY, AND NOMENCLATURE.
RX   PubMed=18620041; DOI=10.1016/j.ygeno.2008.06.001;
RA   Yang Z., Zhou Y., Wang X., Gu S., Yu J., Liang G., Yan C., Xu C.;
RT   "Genomewide comparative phylogenetic and molecular evolutionary analysis of
RT   tubby-like protein family in Arabidopsis, rice, and poplar.";
RL   Genomics 92:246-253(2008).
CC   -!- TISSUE SPECIFICITY: Ubiquitous. {ECO:0000269|PubMed:18620041}.
CC   -!- SIMILARITY: Belongs to the TUB family. {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=BAF09780.2; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR   EMBL; AP005323; BAD08037.1; -; Genomic_DNA.
DR   EMBL; AP008208; BAF09780.2; ALT_SEQ; Genomic_DNA.
DR   EMBL; AP014958; BAS80512.1; -; Genomic_DNA.
DR   EMBL; CM000139; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AK064855; BAG89242.1; -; mRNA.
DR   RefSeq; XP_015627455.1; XM_015771969.1.
DR   AlphaFoldDB; Q6Z2G9; -.
DR   STRING; 4530.OS02T0705300-01; -.
DR   PaxDb; Q6Z2G9; -.
DR   PRIDE; Q6Z2G9; -.
DR   EnsemblPlants; Os02t0705300-01; Os02t0705300-01; Os02g0705300.
DR   GeneID; 4330460; -.
DR   Gramene; Os02t0705300-01; Os02t0705300-01; Os02g0705300.
DR   KEGG; osa:4330460; -.
DR   eggNOG; KOG2502; Eukaryota.
DR   HOGENOM; CLU_028236_3_0_1; -.
DR   InParanoid; Q6Z2G9; -.
DR   OMA; CTMNSIS; -.
DR   OrthoDB; 1445357at2759; -.
DR   Proteomes; UP000000763; Chromosome 2.
DR   Proteomes; UP000007752; Chromosome 2.
DR   Proteomes; UP000059680; Chromosome 2.
DR   ExpressionAtlas; Q6Z2G9; baseline and differential.
DR   Genevisible; Q6Z2G9; OS.
DR   Gene3D; 3.20.90.10; -; 1.
DR   InterPro; IPR036047; F-box-like_dom_sf.
DR   InterPro; IPR001810; F-box_dom.
DR   InterPro; IPR025659; Tubby-like_C.
DR   InterPro; IPR000007; Tubby_C.
DR   InterPro; IPR018066; Tubby_C_CS.
DR   Pfam; PF00646; F-box; 1.
DR   Pfam; PF01167; Tub; 1.
DR   PRINTS; PR01573; SUPERTUBBY.
DR   SUPFAM; SSF54518; SSF54518; 1.
DR   SUPFAM; SSF81383; SSF81383; 1.
DR   PROSITE; PS01200; TUB_1; 1.
DR   PROSITE; PS01201; TUB_2; 1.
PE   2: Evidence at transcript level;
KW   Reference proteome.
FT   CHAIN           1..428
FT                   /note="Tubby-like F-box protein 5"
FT                   /id="PRO_0000351124"
FT   DOMAIN          65..117
FT                   /note="F-box"
FT   REGION          17..65
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        41..65
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   428 AA;  47761 MW;  375067142E767BC9 CRC64;
     MSLKSIVREL REMRDGIGSM SRRAADGRAG GGRGGSRHSW PVLWSEQQQP PQQQQLQRQE
     HQQQQGRWAN LPPELLLDVI QRVEASEATW PARRQVVACA AVCRSWREVT KEVVKTLEEC
     GRITFPISLK QPGPREHPVQ CFVRRDRATS TYLLYLGLSP SLHGENDKLL LAARKIRRAT
     RTSFVISLVS NDFSLSSSTY VGKLKPNFLG TKFTIFDSQP PCDAVVLPNN RPSKRHFKQV
     SPRLPLGNYN VATVSYELTV LRNRGPRRMQ CTMHSIPALC IQEGGKAPTP TGIIHSLDEQ
     VPALSTSKGK EPAIEFSSTS LSADLSGPVC TNEVPLVLKN KAPRWHEQLQ CWCLNFRGRV
     TVASVKNFQL VASVDPSLGI PAAEQEKVIL QFGKIGKDIF TMDYRYPLSA FQAFAICLTS
     FDTKPACE