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TLR5_MOUSE
ID   TLR5_MOUSE              Reviewed;         859 AA.
AC   Q9JLF7;
DT   31-JAN-2002, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-2000, sequence version 1.
DT   03-AUG-2022, entry version 148.
DE   RecName: Full=Toll-like receptor 5;
DE   Flags: Precursor;
GN   Name=Tlr5;
OS   Mus musculus (Mouse).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC   Murinae; Mus; Mus.
OX   NCBI_TaxID=10090;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA], AND VARIANTS.
RC   STRAIN=C57BL/6J, and MOLF/EiJ; TISSUE=Liver;
RX   PubMed=10756091; DOI=10.1006/geno.2000.6115;
RA   Sebastiani G., Leveque G., Lariviere L., Laroche L., Skamene E., Gros P.,
RA   Malo D.;
RT   "Cloning and characterization of the murine Toll-like receptor 5 (Tlr5)
RT   gene: sequence and mRNA expression studies in Salmonella-susceptible
RT   MOLF/Ei mice.";
RL   Genomics 64:230-240(2000).
RN   [2]
RP   FUNCTION, DISRUPTION PHENOTYPE, AND TISSUE SPECIFICITY.
RX   PubMed=30089902; DOI=10.1038/s41586-018-0395-5;
RA   Fulde M., Sommer F., Chassaing B., van Vorst K., Dupont A., Hensel M.,
RA   Basic M., Klopfleisch R., Rosenstiel P., Bleich A., Baeckhed F.,
RA   Gewirtz A.T., Hornef M.W.;
RT   "Neonatal selection by Toll-like receptor 5 influences long-term gut
RT   microbiota composition.";
RL   Nature 560:489-493(2018).
CC   -!- FUNCTION: Pattern recognition receptor (PRR) located on the cell
CC       surface that participates in the activation of innate immunity and
CC       inflammatory response. Recognizes small molecular motifs named
CC       pathogen-associated molecular pattern (PAMPs) expressed by pathogens
CC       and microbe-associated molecular patterns (MAMPs) usually expressed by
CC       resident microbiota. Upon ligand binding such as bacterial flagellins,
CC       recruits intracellular adapter proteins MYD88 and TRIF leading to NF-
CC       kappa-B activation, cytokine secretion and induction of the
CC       inflammatory response. Plays thereby an important role in the
CC       relationship between the intestinal epithelium and enteric microbes and
CC       contributes to the gut microbiota composition throughout life.
CC       {ECO:0000250|UniProtKB:O60602, ECO:0000269|PubMed:30089902}.
CC   -!- SUBUNIT: Homodimer. Interacts with MYD88 (via TIR domain). Interacts
CC       with TICAM1 (via TIR domain). Interacts with UNC93B1; this interaction
CC       is essential for proper TLR5 localization to the plasma membrane.
CC       {ECO:0000250|UniProtKB:O60602}.
CC   -!- INTERACTION:
CC       Q9JLF7; Q56086: flag; Xeno; NbExp=2; IntAct=EBI-6548397, EBI-6548623;
CC       Q9JLF7; A0A0H3NMJ6: fliC; Xeno; NbExp=2; IntAct=EBI-6548397, EBI-6548383;
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000250}; Single-pass type I
CC       membrane protein {ECO:0000250}.
CC   -!- TISSUE SPECIFICITY: Highly expressed in liver (PubMed:30089902).
CC       Detected in lung and at very low levels in most other tissues.
CC       {ECO:0000269|PubMed:30089902}.
CC   -!- PTM: Phosphorylated at Tyr-799 upon flagellin binding; required for
CC       signaling. {ECO:0000250}.
CC   -!- POLYMORPHISM: The TLR5 gene lies in a locus that is associated with
CC       susceptibility to Salmonella. Inbred strains of mice can be classified
CC       into 3 categories according to their resistance to infection with
CC       S.typhimurium: susceptible (BALB/c, C57BL/6, C3H/He), intermediate
CC       (DBA/2, C75L) and resistant (A, CBA). The strain MOLF/Ei is highly
CC       susceptible to the infection, has an unique TLR5 haplotype and a lower
CC       expression of TRL5.
CC   -!- DISRUPTION PHENOTYPE: Deficient mice exhibit a markedly altered enteric
CC       microbiota composition, with increased levels of fecal flagellin.
CC       {ECO:0000269|PubMed:30089902}.
CC   -!- SIMILARITY: Belongs to the Toll-like receptor family. {ECO:0000305}.
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DR   EMBL; AF186107; AAF65625.1; -; mRNA.
DR   CCDS; CCDS35815.1; -.
DR   RefSeq; NP_058624.2; NM_016928.3.
DR   AlphaFoldDB; Q9JLF7; -.
DR   SMR; Q9JLF7; -.
DR   BioGRID; 207467; 2.
DR   IntAct; Q9JLF7; 6.
DR   STRING; 10090.ENSMUSP00000106625; -.
DR   GlyGen; Q9JLF7; 9 sites.
DR   iPTMnet; Q9JLF7; -.
DR   PhosphoSitePlus; Q9JLF7; -.
DR   PaxDb; Q9JLF7; -.
DR   PRIDE; Q9JLF7; -.
DR   ProteomicsDB; 259515; -.
DR   DNASU; 53791; -.
DR   GeneID; 53791; -.
DR   KEGG; mmu:53791; -.
DR   CTD; 7100; -.
DR   MGI; MGI:1858171; Tlr5.
DR   eggNOG; KOG4641; Eukaryota.
DR   InParanoid; Q9JLF7; -.
DR   PhylomeDB; Q9JLF7; -.
DR   BioGRID-ORCS; 53791; 0 hits in 56 CRISPR screens.
DR   PRO; PR:Q9JLF7; -.
DR   Proteomes; UP000000589; Unplaced.
DR   RNAct; Q9JLF7; protein.
DR   GO; GO:0005887; C:integral component of plasma membrane; IBA:GO_Central.
DR   GO; GO:0016020; C:membrane; ISO:MGI.
DR   GO; GO:0005149; F:interleukin-1 receptor binding; ISO:MGI.
DR   GO; GO:0038023; F:signaling receptor activity; IBA:GO_Central.
DR   GO; GO:0004888; F:transmembrane signaling receptor activity; IEA:InterPro.
DR   GO; GO:0042742; P:defense response to bacterium; IEA:InterPro.
DR   GO; GO:0006954; P:inflammatory response; IBA:GO_Central.
DR   GO; GO:0045087; P:innate immune response; IEA:UniProtKB-KW.
DR   GO; GO:0002755; P:MyD88-dependent toll-like receptor signaling pathway; IEA:InterPro.
DR   GO; GO:0032757; P:positive regulation of interleukin-8 production; ISO:MGI.
DR   GO; GO:0045429; P:positive regulation of nitric oxide biosynthetic process; ISO:MGI.
DR   GO; GO:0034123; P:positive regulation of toll-like receptor signaling pathway; ISO:MGI.
DR   GO; GO:0034146; P:toll-like receptor 5 signaling pathway; IEA:InterPro.
DR   GO; GO:0002224; P:toll-like receptor signaling pathway; IBA:GO_Central.
DR   Gene3D; 3.40.50.10140; -; 1.
DR   Gene3D; 3.80.10.10; -; 3.
DR   InterPro; IPR000483; Cys-rich_flank_reg_C.
DR   InterPro; IPR001611; Leu-rich_rpt.
DR   InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
DR   InterPro; IPR032675; LRR_dom_sf.
DR   InterPro; IPR000157; TIR_dom.
DR   InterPro; IPR027176; TLR5.
DR   InterPro; IPR017241; Toll-like_receptor.
DR   InterPro; IPR035897; Toll_tir_struct_dom_sf.
DR   PANTHER; PTHR24365; PTHR24365; 1.
DR   PANTHER; PTHR24365:SF525; PTHR24365:SF525; 1.
DR   Pfam; PF13855; LRR_8; 3.
DR   Pfam; PF01582; TIR; 1.
DR   PIRSF; PIRSF037595; Toll-like_receptor; 1.
DR   SMART; SM00369; LRR_TYP; 9.
DR   SMART; SM00082; LRRCT; 1.
DR   SMART; SM00255; TIR; 1.
DR   SUPFAM; SSF52200; SSF52200; 1.
DR   PROSITE; PS51450; LRR; 14.
DR   PROSITE; PS50104; TIR; 1.
PE   1: Evidence at protein level;
KW   Disulfide bond; Glycoprotein; Immunity; Inflammatory response;
KW   Innate immunity; Leucine-rich repeat; Membrane; Phosphoprotein; Receptor;
KW   Reference proteome; Repeat; Signal; Transmembrane; Transmembrane helix.
FT   SIGNAL          1..26
FT                   /evidence="ECO:0000255"
FT   CHAIN           27..859
FT                   /note="Toll-like receptor 5"
FT                   /id="PRO_0000034730"
FT   TOPO_DOM        27..641
FT                   /note="Extracellular"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        642..662
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        663..859
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000255"
FT   REPEAT          45..69
FT                   /note="LRR 1"
FT   REPEAT          72..94
FT                   /note="LRR 2"
FT   REPEAT          96..118
FT                   /note="LRR 3"
FT   REPEAT          121..144
FT                   /note="LRR 4"
FT   REPEAT          147..167
FT                   /note="LRR 5"
FT   REPEAT          172..193
FT                   /note="LRR 6"
FT   REPEAT          198..212
FT                   /note="LRR 7"
FT   REPEAT          215..230
FT                   /note="LRR 8"
FT   REPEAT          235..236
FT                   /note="LRR 9"
FT   REPEAT          261..285
FT                   /note="LRR 11"
FT   REPEAT          290..302
FT                   /note="LRR 12"
FT   REPEAT          314..335
FT                   /note="LRR 13"
FT   REPEAT          338..356
FT                   /note="LRR 14"
FT   REPEAT          386..402
FT                   /note="LRR 16"
FT   REPEAT          413..432
FT                   /note="LRR 17"
FT   REPEAT          450..471
FT                   /note="LRR 18"
FT   REPEAT          475..496
FT                   /note="LRR 19"
FT   REPEAT          504..525
FT                   /note="LRR 20"
FT   REPEAT          528..547
FT                   /note="LRR 21"
FT   REPEAT          550..568
FT                   /note="LRR 22"
FT   DOMAIN          580..632
FT                   /note="LRRCT"
FT   DOMAIN          692..837
FT                   /note="TIR"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00204"
FT   MOD_RES         799
FT                   /note="Phosphotyrosine"
FT                   /evidence="ECO:0000250|UniProtKB:O60602"
FT   CARBOHYD        37
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        46
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        84
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        246
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        343
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        438
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        596
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        599
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        624
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   DISULFID        584..611
FT                   /evidence="ECO:0000250"
FT   DISULFID        586..630
FT                   /evidence="ECO:0000250"
FT   VARIANT         226
FT                   /note="G -> D (in strain: MOLF/Ei)"
FT   VARIANT         399
FT                   /note="A -> T (in strain: MOLF/Ei)"
FT   VARIANT         470
FT                   /note="P -> T (in strain: MOLF/Ei)"
FT   VARIANT         482
FT                   /note="T -> A (in strain: MOLF/Ei)"
FT   VARIANT         609
FT                   /note="V -> M (in strain: MOLF/Ei)"
FT   VARIANT         619
FT                   /note="G -> A (in strain: MOLF/Ei)"
FT   VARIANT         835
FT                   /note="G -> E (in strain: MOLF/Ei)"
FT   VARIANT         843
FT                   /note="G -> A (in strain: MOLF/Ei)"
SQ   SEQUENCE   859 AA;  97627 MW;  74CD915EA3F0275F CRC64;
     MACQLDLLIG VIFMASPVLV ISPCSSDGRI AFFRGCNLTQ IPWILNTTTE RLLLSFNYIS
     MVVATSFPLL ERLQLLELGT QYANLTIGPG AFRNLPNLRI LDLGQSQIEV LNRDAFQGLP
     HLLELRLFSC GLSSAVLSDG YFRNLYSLAR LDLSGNQIHS LRLHSSFREL NSLSDVNFAF
     NQIFTICEDE LEPLQGKTLS FFGLKLTKLF SRVSVGWETC RNPFRGVRLE TLDLSENGWT
     VDITRNFSNI IQGSQISSLI LKHHIMGPGF GFQNIRDPDQ STFASLARSS VLQLDLSHGF
     IFSLNPRLFG TLKDLKMLNL AFNKINKIGE NAFYGLDSLQ VLNLSYNLLG ELYNSNFYGL
     PRVAYVDLQR NHIGIIQDQT FRLLKTLQTL DLRDNALKAI GFIPSIQMVL LGGNKLVHLP
     HIHFTANFLE LSENRLENLS DLYFLLRVPQ LQFLILNQNR LSSCKAAHTP SENPSLEQLF
     LTENMLQLAW ETGLCWDVFQ GLSRLQILYL SNNYLNFLPP GIFNDLVALR MLSLSANKLT
     VLSPGSLPAN LEILDISRNQ LLCPDPALFS SLRVLDITHN EFVCNCELST FISWLNQTNV
     TLFGSPADVY CMYPNSLLGG SLYNISTEDC DEEEAMRSLK FSLFILCTVT LTLFLVITLV
     VIKFRGICFL CYKTIQKLVF KDKVWSLEPG AYRYDAYFCF SSKDFEWAQN ALLKHLDAHY
     SSRNRLRLCF EERDFIPGEN HISNIQAAVW GSRKTVCLVS RHFLKDGWCL EAFRYAQSRS
     LSDLKSILIV VVVGSLSQYQ LMRHETIRGF LQKQQYLRWP EDLQDVGWFL DKLSGCILKE
     EKGKKRSSSI QLRTIATIS
 
 
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