TM104_CAEBR
ID TM104_CAEBR Reviewed; 492 AA.
AC Q610N4; A8XQY5;
DT 31-OCT-2006, integrated into UniProtKB/Swiss-Prot.
DT 22-SEP-2009, sequence version 2.
DT 25-MAY-2022, entry version 66.
DE RecName: Full=Transmembrane protein 104 homolog;
GN ORFNames=CBG17386;
OS Caenorhabditis briggsae.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6238;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AF16;
RX PubMed=14624247; DOI=10.1371/journal.pbio.0000045;
RA Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N.,
RA Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P.,
RA Fitch D.H.A., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W.,
RA Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A.,
RA Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E.,
RA Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K.,
RA Durbin R.M., Waterston R.H.;
RT "The genome sequence of Caenorhabditis briggsae: a platform for comparative
RT genomics.";
RL PLoS Biol. 1:166-192(2003).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the TMEM104 family. {ECO:0000305}.
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DR EMBL; HE600924; CAP35060.2; -; Genomic_DNA.
DR AlphaFoldDB; Q610N4; -.
DR STRING; 6238.CBG17386; -.
DR WormBase; CBG17386; CBP41580; WBGene00037029; -.
DR eggNOG; KOG3832; Eukaryota.
DR HOGENOM; CLU_025541_1_0_1; -.
DR InParanoid; Q610N4; -.
DR OMA; DVVCDQT; -.
DR OrthoDB; 789592at2759; -.
DR Proteomes; UP000008549; Chromosome X.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR InterPro; IPR013057; AA_transpt_TM.
DR Pfam; PF01490; Aa_trans; 1.
PE 3: Inferred from homology;
KW Glycoprotein; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..492
FT /note="Transmembrane protein 104 homolog"
FT /id="PRO_0000254183"
FT TOPO_DOM 1..18
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 19..39
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 40..45
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 46..66
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 67..114
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 115..135
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 136..177
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 178..198
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 199..210
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 211..231
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 232..238
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 239..259
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 260..275
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 276..296
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 297..325
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 326..346
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 347..391
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 392..412
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 413..415
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 416..436
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 437..466
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 467..487
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 488..492
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT REGION 367..387
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CARBOHYD 152
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 314
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 492 AA; 54104 MW; 3D7C3DD4B24BF095 CRC64;
MQSNTDSSGT SGTYSQTVGL LYVFNLIVGT GALALPKAFQ SAGWLLSISL LTFSAFMSYV
AATFVIEALS VANAVLSKKR RVEYDDVVVA DGPSTFEIAK KVEVSEMASM FLSKVSLVFS
YFAIIIYLFG DLAIYSTTVP KSAMNIVCST INATIVKSSD PCHESWPEIL TRMTVYRFFV
IVFVVVVCLP MVIAGITKTR HIQIMTTLSR WAAFILMISL ATMQLSSQGA AAHPPAYNFH
GFGSLFGCAV YAFMCHHSIP SLITPMRTKE NVFGKIAVVY GIVGVFYFTL SLTGAFAFEH
VQDIYTLNFL HDDNTSLVYS IIDYFLALFP IITLTSSYPI IALTLINNFK VVKDILCPKT
GQENESLLEA DNQVEDNDTD DEREARNGNP KTIFDVLVPT LVLALPTFLS LLTDDMLLLA
SITGSFPGVA VQFAIPCLLV TAARKHARSV LNFPVPRKNN SPFQSRFWIM LISSWAGFSM
IMVLLNLVGV KF