TM10B_RAT
ID TM10B_RAT Reviewed; 316 AA.
AC Q5RJK3;
DT 13-NOV-2007, integrated into UniProtKB/Swiss-Prot.
DT 21-DEC-2004, sequence version 1.
DT 03-AUG-2022, entry version 95.
DE RecName: Full=tRNA methyltransferase 10 homolog B;
DE EC=2.1.1.221 {ECO:0000250|UniProtKB:Q6PF06};
DE AltName: Full=RNA (guanine-9-)-methyltransferase domain-containing protein 3;
DE AltName: Full=tRNA (guanine(9)-N(1))-methyltransferase TRMT10B;
GN Name=Trmt10b; Synonyms=Rg9mtd3;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Brain;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- FUNCTION: S-adenosyl-L-methionine-dependent guanine N(1)-
CC methyltransferase that catalyzes the formation of N(1)-methylguanine at
CC position 9 (m1G9) in tRNAs. Probably not able to catalyze formation of
CC N(1)-methyladenine at position 9 (m1A9) in tRNAs.
CC {ECO:0000250|UniProtKB:Q6PF06}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=guanosine(9) in tRNA + S-adenosyl-L-methionine = H(+) + N(1)-
CC methylguanosine(9) in tRNA + S-adenosyl-L-homocysteine;
CC Xref=Rhea:RHEA:43156, Rhea:RHEA-COMP:10367, Rhea:RHEA-COMP:10368,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:57856, ChEBI:CHEBI:59789,
CC ChEBI:CHEBI:73542, ChEBI:CHEBI:74269; EC=2.1.1.221;
CC Evidence={ECO:0000250|UniProtKB:Q6PF06};
CC -!- SIMILARITY: Belongs to the class IV-like SAM-binding methyltransferase
CC superfamily. TRM10 family. {ECO:0000255|PROSITE-ProRule:PRU01012}.
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DR EMBL; BC086603; AAH86603.1; -; mRNA.
DR RefSeq; NP_001013108.1; NM_001013090.2.
DR RefSeq; XP_006238104.1; XM_006238042.1.
DR RefSeq; XP_006238105.1; XM_006238043.2.
DR RefSeq; XP_006238106.1; XM_006238044.3.
DR AlphaFoldDB; Q5RJK3; -.
DR SMR; Q5RJK3; -.
DR STRING; 10116.ENSRNOP00000016719; -.
DR PaxDb; Q5RJK3; -.
DR PRIDE; Q5RJK3; -.
DR Ensembl; ENSRNOT00000016720; ENSRNOP00000016719; ENSRNOG00000012454.
DR GeneID; 298081; -.
DR KEGG; rno:298081; -.
DR UCSC; RGD:1310735; rat.
DR CTD; 158234; -.
DR RGD; 1310735; Trmt10b.
DR eggNOG; KOG2967; Eukaryota.
DR GeneTree; ENSGT00530000063169; -.
DR HOGENOM; CLU_034384_8_0_1; -.
DR InParanoid; Q5RJK3; -.
DR OMA; ALQAWFP; -.
DR OrthoDB; 1396299at2759; -.
DR PhylomeDB; Q5RJK3; -.
DR TreeFam; TF330972; -.
DR PRO; PR:Q5RJK3; -.
DR Proteomes; UP000002494; Chromosome 5.
DR Bgee; ENSRNOG00000012454; Expressed in pancreas and 19 other tissues.
DR Genevisible; Q5RJK3; RN.
DR GO; GO:0005829; C:cytosol; ISO:RGD.
DR GO; GO:0005743; C:mitochondrial inner membrane; ISO:RGD.
DR GO; GO:0005654; C:nucleoplasm; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0042721; C:TIM22 mitochondrial import inner membrane insertion complex; ISO:RGD.
DR GO; GO:0052905; F:tRNA (guanine(9)-N(1))-methyltransferase activity; IEA:UniProtKB-EC.
DR GO; GO:0009019; F:tRNA (guanine-N1-)-methyltransferase activity; ISO:RGD.
DR GO; GO:0000049; F:tRNA binding; IBA:GO_Central.
DR GO; GO:0045039; P:protein insertion into mitochondrial inner membrane; ISO:RGD.
DR GO; GO:0002939; P:tRNA N1-guanine methylation; IBA:GO_Central.
DR Gene3D; 3.40.1280.30; -; 1.
DR InterPro; IPR028564; MT_TRM10-typ.
DR InterPro; IPR038459; MT_TRM10-typ_sf.
DR InterPro; IPR007356; tRNA_m1G_MeTrfase_euk.
DR InterPro; IPR016009; tRNA_MeTrfase_TRMD/TRM10.
DR PANTHER; PTHR13563; PTHR13563; 1.
DR Pfam; PF01746; tRNA_m1G_MT; 1.
DR PROSITE; PS51675; SAM_MT_TRM10; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Methyltransferase; Reference proteome;
KW S-adenosyl-L-methionine; Transferase.
FT CHAIN 1..316
FT /note="tRNA methyltransferase 10 homolog B"
FT /id="PRO_0000311323"
FT DOMAIN 113..310
FT /note="SAM-dependent MTase TRM10-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01012"
FT REGION 1..30
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 42..98
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 75..96
FT /evidence="ECO:0000255"
FT COMPBIAS 71..87
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 316 AA; 36430 MW; 8106B282C65C2953 CRC64;
MDCEWEGRPQ RAGSRASQDP EGLPEARDDG LSESFLLLQM DVEYDPQEKR RPANSAAWSS
KNVQRKQRHW ERIVSSKKSK RKQERERRKI KRAEDLGNGT CPQHSKRFLK ALTKEKLLEA
KHSGPRLCVD LSMTQHMSKK ELSRLAGQIR RLYGSNKKAS RPFWIYLTGF STDSPLYEEC
LRMNDGFSAY VLDVTEEDCF SLFPLETLVY LTPDSEHPLE DIDLSTVYII GGLVDESIQK
KVTFQKAQEY SVKTARLPIQ EHMIRCQNEK NFHSEILAIN QVFDILSAYL ETRDWPEALK
KGVSPGKGYI LQNSVE