TM204_RAT
ID TM204_RAT Reviewed; 226 AA.
AC Q5M962;
DT 30-AUG-2005, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-2005, sequence version 1.
DT 03-AUG-2022, entry version 93.
DE RecName: Full=Transmembrane protein 204;
DE AltName: Full=Claudin-like protein 24;
GN Name=Tmem204; Synonyms=Clp24;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Brain;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- FUNCTION: Can influence paracellular permeability. Appears to be
CC involved in cell-cell interactions through adherens (By similarity).
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cell junction, adherens junction. Cell membrane
CC {ECO:0000250}; Multi-pass membrane protein {ECO:0000250}. Note=Co-
CC localizes with the beta-catenin adherins. {ECO:0000250}.
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DR EMBL; BC087601; AAH87601.1; -; mRNA.
DR RefSeq; NP_001009620.1; NM_001009620.1.
DR RefSeq; XP_017452554.1; XM_017597065.1.
DR AlphaFoldDB; Q5M962; -.
DR STRING; 10116.ENSRNOP00000022142; -.
DR GlyGen; Q5M962; 1 site.
DR PaxDb; Q5M962; -.
DR Ensembl; ENSRNOT00000022142; ENSRNOP00000022142; ENSRNOG00000016494.
DR GeneID; 287129; -.
DR KEGG; rno:287129; -.
DR UCSC; RGD:1359314; rat.
DR CTD; 79652; -.
DR RGD; 1359314; Tmem204.
DR eggNOG; ENOG502QTQQ; Eukaryota.
DR GeneTree; ENSGT00390000015528; -.
DR HOGENOM; CLU_107201_0_0_1; -.
DR InParanoid; Q5M962; -.
DR OMA; EYVESPC; -.
DR OrthoDB; 1317636at2759; -.
DR PhylomeDB; Q5M962; -.
DR TreeFam; TF331492; -.
DR PRO; PR:Q5M962; -.
DR Proteomes; UP000002494; Chromosome 10.
DR Bgee; ENSRNOG00000016494; Expressed in lung and 18 other tissues.
DR Genevisible; Q5M962; RN.
DR GO; GO:0005912; C:adherens junction; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; ISO:RGD.
DR GO; GO:0001945; P:lymph vessel development; ISO:RGD.
DR GO; GO:0030947; P:regulation of vascular endothelial growth factor receptor signaling pathway; ISO:RGD.
DR GO; GO:0051145; P:smooth muscle cell differentiation; ISO:RGD.
DR InterPro; IPR038992; TMEM204.
DR PANTHER; PTHR14627; PTHR14627; 1.
PE 2: Evidence at transcript level;
KW Cell junction; Cell membrane; Glycoprotein; Membrane; Reference proteome;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..226
FT /note="Transmembrane protein 204"
FT /id="PRO_0000089867"
FT TOPO_DOM 1..5
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 6..26
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 27..103
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 104..124
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 125..136
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 137..157
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 158..170
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 171..191
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 192..226
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT CARBOHYD 164
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 226 AA; 24701 MW; 24E18378EE501969 CRC64;
MTVQKLVATA VLVALVSLIL NNAAAFTPNW VYQTLEDGRK RSVGLWKSCW LVDRGKGGTS
PGTRTGQVDT HDCEVLGWGS ESAGFQESRG TVKLQFDMMR ACNLVATAAL AVGQITFILG
LTGLPLMSPE SQCWEEAMAA AFQLASFVLV IGLVTFYRIG PYTNLSWSCY LNIGACLLAT
LAAAMLIWNI LHRREDCMAP RVIVISRSLT ARFRRGLDND YVESPC