TM231_DANRE
ID TM231_DANRE Reviewed; 309 AA.
AC Q7T316; E9QBY7; F1QPZ2;
DT 05-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 22-FEB-2012, sequence version 2.
DT 03-AUG-2022, entry version 87.
DE RecName: Full=Transmembrane protein 231;
GN Name=tmem231; ORFNames=zgc:64166;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen;
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M.,
RA Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I.,
RA Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.,
RA White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y.,
RA Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B.,
RA Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S.,
RA Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S.,
RA Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N.,
RA Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J.,
RA Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J.,
RA Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D.,
RA McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S.,
RA Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E.,
RA Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A.,
RA Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P.,
RA Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C.,
RA Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C.,
RA Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M.,
RA Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C., Raddatz G.,
RA Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F.,
RA Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M.,
RA Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M.,
RA de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C.,
RA Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the human
RT genome.";
RL Nature 496:498-503(2013).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Kidney;
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (JUN-2003) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Transmembrane component of the tectonic-like complex, a
CC complex localized at the transition zone of primary cilia and acting as
CC a barrier that prevents diffusion of transmembrane proteins between the
CC cilia and plasma membranes. Required for ciliogenesis and sonic
CC hedgehog/SHH signaling (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Part of the tectonic-like complex (also named B9 complex).
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cell projection, cilium membrane {ECO:0000250};
CC Multi-pass membrane protein {ECO:0000250}. Note=Localizes to the
CC transition zone of primary cilia; SEPT2 is required for localization to
CC the transition zone. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the TMEM231 family. {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; BX890570; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; BC053293; AAH53293.1; -; mRNA.
DR RefSeq; NP_956681.1; NM_200387.1.
DR AlphaFoldDB; Q7T316; -.
DR STRING; 7955.ENSDARP00000061995; -.
DR PaxDb; Q7T316; -.
DR Ensembl; ENSDART00000061996; ENSDARP00000061995; ENSDARG00000042272.
DR GeneID; 393358; -.
DR KEGG; dre:393358; -.
DR CTD; 79583; -.
DR ZFIN; ZDB-GENE-040426-1386; tmem231.
DR eggNOG; KOG4838; Eukaryota.
DR GeneTree; ENSGT00390000015366; -.
DR HOGENOM; CLU_070969_0_0_1; -.
DR InParanoid; Q7T316; -.
DR OMA; QLPARYH; -.
DR OrthoDB; 1247968at2759; -.
DR PhylomeDB; Q7T316; -.
DR TreeFam; TF312969; -.
DR PRO; PR:Q7T316; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Chromosome 25.
DR Bgee; ENSDARG00000042272; Expressed in testis and 28 other tissues.
DR ExpressionAtlas; Q7T316; baseline.
DR GO; GO:0060170; C:ciliary membrane; ISS:UniProtKB.
DR GO; GO:0035869; C:ciliary transition zone; ISS:UniProtKB.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0036038; C:MKS complex; ISS:UniProtKB.
DR GO; GO:0060271; P:cilium assembly; ISS:UniProtKB.
DR GO; GO:0032880; P:regulation of protein localization; IBA:GO_Central.
DR GO; GO:0007224; P:smoothened signaling pathway; ISS:UniProtKB.
DR InterPro; IPR019306; TMEM231.
DR PANTHER; PTHR14605; PTHR14605; 1.
DR Pfam; PF10149; TM231; 1.
PE 2: Evidence at transcript level;
KW Cell membrane; Cell projection; Cilium; Cilium biogenesis/degradation;
KW Glycoprotein; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..309
FT /note="Transmembrane protein 231"
FT /id="PRO_0000317524"
FT TRANSMEM 23..43
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 267..287
FT /note="Helical"
FT /evidence="ECO:0000255"
FT CARBOHYD 193
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 220
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CONFLICT 32
FT /note="G -> C (in Ref. 2; AAH53293)"
FT /evidence="ECO:0000305"
FT CONFLICT 53
FT /note="N -> S (in Ref. 2; AAH53293)"
FT /evidence="ECO:0000305"
FT CONFLICT 258
FT /note="R -> Q (in Ref. 2; AAH53293)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 309 AA; 35538 MW; AC1142471944EA3B CRC64;
MAFYDVYAHP ALIRYRTCVC TRATLFVCVV LGLTYISPLL VAYRSQGFWL KRNSYEEQPV
VKFQYDLILL GVTDTTGNYL AWSTFPNFNR LIGDNLRIPE ISAQEEDKNQ DGKSDVLLLQ
ISVPLKPAEQ MFSVQLLLTF SYQLFRMSTV VMQTLAFIQH SSPVPGSQLF ICGDLRLNQR
TPLPHRGLHS TYNVSVIDGS SPFASTYDLT NIIRLYQQRN LTTHLSGVIP VWTVGRAANA
PFQISAQIHY PVEMIDYRPG FWETIKFAWI QYVSVLLIFL WVFQHIQTFI FQNQVLPTIT
IPPFKQHRS