TM236_DANRE
ID TM236_DANRE Reviewed; 350 AA.
AC A5WVU6;
DT 31-MAY-2011, integrated into UniProtKB/Swiss-Prot.
DT 10-JUL-2007, sequence version 1.
DT 03-AUG-2022, entry version 65.
DE RecName: Full=Transmembrane protein 236;
GN Name=tmem236; ORFNames=si:dkey-32m20.1;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen;
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M.,
RA Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I.,
RA Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.,
RA White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y.,
RA Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B.,
RA Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S.,
RA Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S.,
RA Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N.,
RA Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J.,
RA Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J.,
RA Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D.,
RA McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S.,
RA Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E.,
RA Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A.,
RA Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P.,
RA Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C.,
RA Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C.,
RA Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M.,
RA Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C., Raddatz G.,
RA Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F.,
RA Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M.,
RA Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M.,
RA de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C.,
RA Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the human
RT genome.";
RL Nature 496:498-503(2013).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the TMEM236 family. {ECO:0000305}.
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DR EMBL; CT027716; CAN88071.1; -; Genomic_DNA.
DR RefSeq; NP_001093549.1; NM_001100079.1.
DR AlphaFoldDB; A5WVU6; -.
DR STRING; 7955.ENSDARP00000101648; -.
DR PaxDb; A5WVU6; -.
DR Ensembl; ENSDART00000136360; ENSDARP00000116369; ENSDARG00000075715.
DR GeneID; 100002496; -.
DR KEGG; dre:100002496; -.
DR CTD; 653567; -.
DR eggNOG; ENOG502QVFM; Eukaryota.
DR GeneTree; ENSGT00390000015525; -.
DR HOGENOM; CLU_072609_0_0_1; -.
DR InParanoid; A5WVU6; -.
DR OMA; FFIIRVA; -.
DR OrthoDB; 667499at2759; -.
DR PhylomeDB; A5WVU6; -.
DR PRO; PR:A5WVU6; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Chromosome 2.
DR Bgee; ENSDARG00000075715; Expressed in intestine and 5 other tissues.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR InterPro; IPR020394; Uncharacterised_FAM23-like_TM.
DR PANTHER; PTHR31453; PTHR31453; 1.
PE 3: Inferred from homology;
KW Membrane; Reference proteome; Transmembrane; Transmembrane helix.
FT CHAIN 1..350
FT /note="Transmembrane protein 236"
FT /id="PRO_0000409539"
FT TRANSMEM 9..29
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 47..67
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 85..105
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 120..140
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 259..279
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 302..322
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 325..345
FT /note="Helical"
FT /evidence="ECO:0000255"
SQ SEQUENCE 350 AA; 39208 MW; 2F29E64F9DFF3EF7 CRC64;
MLSGKTVKLI VFELLQFACL CIPVFVVMER FASVIRFVKS SDTAYWLVVA ASVAYAASVT
LFVWVPLKYF MLKTQRFSEV TNWRPVTLAY VILSTLPCFA IIIASSKVQA DAAIRFDRLT
ELPVSLVLFS LICVDIVERI RPLRLTGKAS GLDLDLEMPG PVLTHLEQVT SISGHLQANG
QDGDASFRSP VSNGSLSGRW EDARTYGLPR TSSSAYLYSH SHSGPFSFLW KRDPRHDLFV
SSFMFWLDTV EMVRVAGTNS VFYSGWVFPI YILAYLSLLR VVITPDSPLL ALSSILSQDL
PFLVVRICLL AVFGYVTPVL YILKNILASI SFVYFVFMTK LKLLNRGSMF